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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
171.5
nTPM
Monaco:
167.9
nTPM
Schmiedel:
20.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.5
HPA sample
nTPM
gdT-cell nTPM: 77.9
Samples: 6
Max nTPM: 94.2
Min nTPM: 71.8
P10809_1007
76.0
P10809_1022
73.1
P10809_1041
74.7
P10809_1060
71.8
P10809_1077
77.7
P10809_1098
94.2
MAIT T-cell nTPM: 144.7
Samples: 6
Max nTPM: 195.0
Min nTPM: 111.5
P10809_1006
131.9
P10809_1024
111.5
P10809_1043
156.6
P10809_1062
147.0
P10809_1083
126.0
P10809_1097
195.0
Memory CD4 T-cell nTPM: 158.7
Samples: 6
Max nTPM: 197.6
Min nTPM: 116.4
P10809_1014
184.1
P10809_1026
197.6
P10809_1045
143.8
P10809_1064
116.4
P10809_1086
135.5
P10809_1113
174.5
Memory CD8 T-cell nTPM: 101.9
Samples: 5
Max nTPM: 137.6
Min nTPM: 75.0
P10809_1012
137.6
P10809_1027
79.7
P10809_1046
118.5
P10809_1065
75.0
P10809_1111
98.9
Naive CD4 T-cell nTPM: 170.1
Samples: 6
Max nTPM: 194.2
Min nTPM: 146.0
P10809_1015
174.9
P10809_1030
179.2
P10809_1049
151.9
P10809_1068
146.0
P10809_1085
174.6
P10809_1112
194.2
Naive CD8 T-cell nTPM: 138.2
Samples: 6
Max nTPM: 203.4
Min nTPM: 74.2
P10809_1016
203.4
P10809_1031
167.1
P10809_1050
125.1
P10809_1069
101.1
P10809_1087
74.2
P10809_1110
158.4
T-reg nTPM: 171.5
Samples: 6
Max nTPM: 241.1
Min nTPM: 138.8
P10809_1018
148.6
P10809_1037
138.8
P10809_1056
241.1
P10809_1075
157.0
P10809_1094
180.3
P10809_1106
163.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.9
Samples: 4
Max nTPM: 171.4
Min nTPM: 82.4
RHH5202_R3573
116.0
RHH5230_R3602
125.8
RHH5259_R3631
82.4
RHH5288_R3660
171.4
Effector memory CD8 T-cell nTPM: 48.9
Samples: 4
Max nTPM: 66.0
Min nTPM: 32.3
RHH5203_R3574
56.7
RHH5231_R3603
66.0
RHH5260_R3632
40.6
RHH5289_R3661
32.3
MAIT T-cell nTPM: 118.8
Samples: 4
Max nTPM: 148.5
Min nTPM: 83.3
RHH5233_R3605
130.3
RHH5205_R3576
83.3
RHH5262_R3634
113.1
RHH5297_R3663
148.5
Memory CD4 T-cell TFH nTPM: 155.9
Samples: 4
Max nTPM: 186.7
Min nTPM: 143.6
RHH5300_R3666
146.2
RHH5236_R3608
186.7
RHH5265_R3637
146.9
RHH5208_R3579
143.6
Memory CD4 T-cell Th1 nTPM: 122.4
Samples: 4
Max nTPM: 157.6
Min nTPM: 90.8
RHH5210_R3581
143.0
RHH5302_R3668
157.6
RHH5238_R3610
98.1
RHH5267_R3639
90.8
Memory CD4 T-cell Th1/Th17 nTPM: 167.9
Samples: 4
Max nTPM: 225.9
Min nTPM: 99.3
RHH5303_R3669
225.9
RHH5211_R3582
221.5
RHH5239_R3611
99.3
RHH5268_R3640
125.0
Memory CD4 T-cell Th17 nTPM: 148.3
Samples: 4
Max nTPM: 233.0
Min nTPM: 104.4
RHH5304_R3670
142.6
RHH5212_R3583
233.0
RHH5240_R3612
113.3
RHH5269_R3641
104.4
Memory CD4 T-cell Th2 nTPM: 134.2
Samples: 4
Max nTPM: 164.2
Min nTPM: 114.4
RHH5305_R3671
140.4
RHH5213_R3584
117.8
RHH5241_R3613
164.2
RHH5270_R3642
114.4
Naive CD4 T-cell nTPM: 144.3
Samples: 4
Max nTPM: 179.4
Min nTPM: 107.0
RHH5306_R3672
149.9
RHH5214_R3585
179.4
RHH5242_R3614
141.0
RHH5271_R3643
107.0
Naive CD8 T-cell nTPM: 139.0
Samples: 4
Max nTPM: 206.9
Min nTPM: 85.3
RHH5201_R3572
151.5
RHH5229_R3601
85.3
RHH5258_R3630
206.9
RHH5287_R3659
112.3
Non-Vd2 gdTCR nTPM: 46.2
Samples: 4
Max nTPM: 66.5
Min nTPM: 28.6
RHH5235_R3607
36.9
RHH5264_R3636
52.9
RHH5207_R3578
28.6
RHH5299_R3665
66.5
T-reg nTPM: 119.8
Samples: 4
Max nTPM: 147.6
Min nTPM: 98.0
RHH5301_R3667
147.6
RHH5237_R3609
119.4
RHH5266_R3638
98.0
RHH5209_R3580
114.3
Terminal effector memory CD4 T-cell nTPM: 51.7
Samples: 2
Max nTPM: 55.8
Min nTPM: 47.6
RHH5243_R3615
55.8
RHH5272_R3644
47.6
Terminal effector memory CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 76.6
Min nTPM: 36.1
RHH5232_R3604
63.0
RHH5204_R3575
72.8
RHH5261_R3633
36.1
RHH5296_R3662
76.6
Vd2 gdTCR nTPM: 99.7
Samples: 4
Max nTPM: 138.0
Min nTPM: 78.4
RHH5234_R3606
82.3
RHH5206_R3577
100.1
RHH5263_R3635
78.4
RHH5298_R3664
138.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
