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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.1
nTPM
Monaco:
93.0
nTPM
Schmiedel:
38.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.1
HPA sample
nTPM
gdT-cell nTPM: 93.9
Samples: 6
Max nTPM: 130.8
Min nTPM: 62.2
P10809_1007
62.2
P10809_1022
117.9
P10809_1041
130.8
P10809_1060
87.3
P10809_1077
77.2
P10809_1098
87.7
MAIT T-cell nTPM: 93.3
Samples: 6
Max nTPM: 126.4
Min nTPM: 62.1
P10809_1006
62.1
P10809_1024
87.3
P10809_1043
115.7
P10809_1062
87.5
P10809_1083
80.5
P10809_1097
126.4
Memory CD4 T-cell nTPM: 87.9
Samples: 6
Max nTPM: 119.1
Min nTPM: 54.6
P10809_1014
54.6
P10809_1026
119.1
P10809_1045
92.5
P10809_1064
93.1
P10809_1086
79.0
P10809_1113
89.0
Memory CD8 T-cell nTPM: 95.2
Samples: 5
Max nTPM: 111.1
Min nTPM: 72.4
P10809_1012
72.4
P10809_1027
97.2
P10809_1046
111.1
P10809_1065
90.3
P10809_1111
104.8
Naive CD4 T-cell nTPM: 76.3
Samples: 6
Max nTPM: 102.2
Min nTPM: 40.2
P10809_1015
40.2
P10809_1030
93.7
P10809_1049
102.2
P10809_1068
79.6
P10809_1085
64.3
P10809_1112
77.8
Naive CD8 T-cell nTPM: 75.3
Samples: 6
Max nTPM: 100.2
Min nTPM: 54.4
P10809_1016
54.4
P10809_1031
84.1
P10809_1050
73.1
P10809_1069
100.2
P10809_1087
74.6
P10809_1110
65.6
T-reg nTPM: 107.0
Samples: 6
Max nTPM: 143.1
Min nTPM: 63.5
P10809_1018
63.5
P10809_1037
83.6
P10809_1056
143.1
P10809_1075
120.4
P10809_1094
93.7
P10809_1106
137.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.8
Samples: 4
Max nTPM: 94.2
Min nTPM: 39.3
RHH5202_R3573
69.8
RHH5230_R3602
59.7
RHH5259_R3631
39.3
RHH5288_R3660
94.2
Effector memory CD8 T-cell nTPM: 74.4
Samples: 4
Max nTPM: 121.1
Min nTPM: 57.5
RHH5203_R3574
59.5
RHH5231_R3603
121.1
RHH5260_R3632
57.5
RHH5289_R3661
59.4
MAIT T-cell nTPM: 72.7
Samples: 4
Max nTPM: 95.6
Min nTPM: 43.1
RHH5233_R3605
78.4
RHH5205_R3576
43.1
RHH5262_R3634
73.8
RHH5297_R3663
95.6
Memory CD4 T-cell TFH nTPM: 81.5
Samples: 4
Max nTPM: 136.8
Min nTPM: 32.7
RHH5300_R3666
87.4
RHH5236_R3608
136.8
RHH5265_R3637
69.0
RHH5208_R3579
32.7
Memory CD4 T-cell Th1 nTPM: 65.8
Samples: 4
Max nTPM: 93.5
Min nTPM: 35.7
RHH5210_R3581
68.2
RHH5302_R3668
93.5
RHH5238_R3610
65.8
RHH5267_R3639
35.7
Memory CD4 T-cell Th1/Th17 nTPM: 66.8
Samples: 4
Max nTPM: 90.9
Min nTPM: 39.2
RHH5303_R3669
90.9
RHH5211_R3582
85.7
RHH5239_R3611
51.3
RHH5268_R3640
39.2
Memory CD4 T-cell Th17 nTPM: 52.5
Samples: 4
Max nTPM: 71.8
Min nTPM: 33.5
RHH5304_R3670
63.9
RHH5212_R3583
71.8
RHH5240_R3612
40.9
RHH5269_R3641
33.5
Memory CD4 T-cell Th2 nTPM: 77.5
Samples: 4
Max nTPM: 115.5
Min nTPM: 59.3
RHH5305_R3671
73.1
RHH5213_R3584
59.3
RHH5241_R3613
115.5
RHH5270_R3642
62.1
Naive CD4 T-cell nTPM: 70.1
Samples: 4
Max nTPM: 89.2
Min nTPM: 25.8
RHH5306_R3672
89.2
RHH5214_R3585
89.1
RHH5242_R3614
76.1
RHH5271_R3643
25.8
Naive CD8 T-cell nTPM: 52.2
Samples: 4
Max nTPM: 73.0
Min nTPM: 41.8
RHH5201_R3572
45.3
RHH5229_R3601
41.8
RHH5258_R3630
73.0
RHH5287_R3659
48.5
Non-Vd2 gdTCR nTPM: 85.8
Samples: 4
Max nTPM: 111.7
Min nTPM: 60.7
RHH5235_R3607
60.7
RHH5264_R3636
111.7
RHH5207_R3578
75.7
RHH5299_R3665
95.2
T-reg nTPM: 69.6
Samples: 4
Max nTPM: 114.6
Min nTPM: 30.5
RHH5301_R3667
70.0
RHH5237_R3609
114.6
RHH5266_R3638
30.5
RHH5209_R3580
63.1
Terminal effector memory CD4 T-cell nTPM: 68.1
Samples: 2
Max nTPM: 87.3
Min nTPM: 48.8
RHH5243_R3615
48.8
RHH5272_R3644
87.3
Terminal effector memory CD8 T-cell nTPM: 93.0
Samples: 4
Max nTPM: 108.5
Min nTPM: 65.7
RHH5232_R3604
108.5
RHH5204_R3575
107.4
RHH5261_R3633
65.7
RHH5296_R3662
90.2
Vd2 gdTCR nTPM: 89.3
Samples: 4
Max nTPM: 116.4
Min nTPM: 51.9
RHH5234_R3606
95.1
RHH5206_R3577
93.6
RHH5263_R3635
51.9
RHH5298_R3664
116.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
