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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.4
nTPM
Monaco:
43.1
nTPM
Schmiedel:
186.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.4
HPA sample
nTPM
gdT-cell nTPM: 14.3
Samples: 6
Max nTPM: 30.7
Min nTPM: 8.7
P10809_1007
9.7
P10809_1022
8.7
P10809_1041
30.7
P10809_1060
10.7
P10809_1077
9.9
P10809_1098
15.8
MAIT T-cell nTPM: 13.3
Samples: 6
Max nTPM: 16.8
Min nTPM: 9.3
P10809_1006
9.3
P10809_1024
10.6
P10809_1043
14.1
P10809_1062
16.8
P10809_1083
14.9
P10809_1097
14.2
Memory CD4 T-cell nTPM: 20.7
Samples: 6
Max nTPM: 31.2
Min nTPM: 16.0
P10809_1014
19.1
P10809_1026
31.2
P10809_1045
20.6
P10809_1064
16.5
P10809_1086
16.0
P10809_1113
20.5
Memory CD8 T-cell nTPM: 13.0
Samples: 5
Max nTPM: 16.7
Min nTPM: 9.4
P10809_1012
9.4
P10809_1027
16.7
P10809_1046
12.0
P10809_1065
12.5
P10809_1111
14.6
Naive CD4 T-cell nTPM: 25.4
Samples: 6
Max nTPM: 35.5
Min nTPM: 16.6
P10809_1015
16.6
P10809_1030
26.5
P10809_1049
35.5
P10809_1068
22.3
P10809_1085
27.8
P10809_1112
23.9
Naive CD8 T-cell nTPM: 17.7
Samples: 6
Max nTPM: 21.5
Min nTPM: 9.0
P10809_1016
17.7
P10809_1031
20.4
P10809_1050
21.4
P10809_1069
16.0
P10809_1087
9.0
P10809_1110
21.5
T-reg nTPM: 15.0
Samples: 6
Max nTPM: 20.1
Min nTPM: 9.5
P10809_1018
9.5
P10809_1037
20.1
P10809_1056
18.4
P10809_1075
14.8
P10809_1094
12.6
P10809_1106
14.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 28.1
Samples: 4
Max nTPM: 38.9
Min nTPM: 20.2
RHH5202_R3573
38.9
RHH5230_R3602
27.1
RHH5259_R3631
26.0
RHH5288_R3660
20.2
Effector memory CD8 T-cell nTPM: 16.7
Samples: 4
Max nTPM: 23.7
Min nTPM: 3.5
RHH5203_R3574
22.4
RHH5231_R3603
23.7
RHH5260_R3632
17.0
RHH5289_R3661
3.5
MAIT T-cell nTPM: 27.8
Samples: 4
Max nTPM: 38.3
Min nTPM: 17.3
RHH5233_R3605
29.9
RHH5205_R3576
17.3
RHH5262_R3634
38.3
RHH5297_R3663
25.8
Memory CD4 T-cell TFH nTPM: 20.6
Samples: 4
Max nTPM: 30.8
Min nTPM: 12.8
RHH5300_R3666
30.8
RHH5236_R3608
12.8
RHH5265_R3637
16.8
RHH5208_R3579
21.9
Memory CD4 T-cell Th1 nTPM: 21.3
Samples: 4
Max nTPM: 25.4
Min nTPM: 18.9
RHH5210_R3581
21.8
RHH5302_R3668
25.4
RHH5238_R3610
18.9
RHH5267_R3639
19.2
Memory CD4 T-cell Th1/Th17 nTPM: 22.6
Samples: 4
Max nTPM: 30.3
Min nTPM: 7.5
RHH5303_R3669
30.0
RHH5211_R3582
7.5
RHH5239_R3611
22.5
RHH5268_R3640
30.3
Memory CD4 T-cell Th17 nTPM: 35.3
Samples: 4
Max nTPM: 47.6
Min nTPM: 18.3
RHH5304_R3670
47.6
RHH5212_R3583
32.1
RHH5240_R3612
43.0
RHH5269_R3641
18.3
Memory CD4 T-cell Th2 nTPM: 28.4
Samples: 4
Max nTPM: 39.9
Min nTPM: 15.7
RHH5305_R3671
15.7
RHH5213_R3584
21.5
RHH5241_R3613
39.9
RHH5270_R3642
36.4
Naive CD4 T-cell nTPM: 34.5
Samples: 4
Max nTPM: 38.2
Min nTPM: 32.5
RHH5306_R3672
33.2
RHH5214_R3585
32.5
RHH5242_R3614
38.2
RHH5271_R3643
33.9
Naive CD8 T-cell nTPM: 43.2
Samples: 4
Max nTPM: 57.9
Min nTPM: 34.3
RHH5201_R3572
34.3
RHH5229_R3601
41.8
RHH5258_R3630
57.9
RHH5287_R3659
38.6
Non-Vd2 gdTCR nTPM: 12.4
Samples: 4
Max nTPM: 17.2
Min nTPM: 4.6
RHH5235_R3607
17.2
RHH5264_R3636
15.0
RHH5207_R3578
4.6
RHH5299_R3665
12.6
T-reg nTPM: 24.7
Samples: 4
Max nTPM: 28.5
Min nTPM: 20.4
RHH5301_R3667
27.3
RHH5237_R3609
28.5
RHH5266_R3638
20.4
RHH5209_R3580
22.7
Terminal effector memory CD4 T-cell nTPM: 26.1
Samples: 2
Max nTPM: 45.5
Min nTPM: 6.6
RHH5243_R3615
45.5
RHH5272_R3644
6.6
Terminal effector memory CD8 T-cell nTPM: 14.4
Samples: 4
Max nTPM: 16.8
Min nTPM: 12.0
RHH5232_R3604
16.8
RHH5204_R3575
12.0
RHH5261_R3633
14.5
RHH5296_R3662
14.4
Vd2 gdTCR nTPM: 19.7
Samples: 4
Max nTPM: 29.7
Min nTPM: 8.9
RHH5234_R3606
22.1
RHH5206_R3577
29.7
RHH5263_R3635
18.2
RHH5298_R3664
8.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
