We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.5
nTPM
Monaco:
87.3
nTPM
Schmiedel:
81.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.5
HPA sample
nTPM
gdT-cell nTPM: 12.3
Samples: 6
Max nTPM: 18.1
Min nTPM: 5.3
P10809_1007
18.1
P10809_1022
10.8
P10809_1041
15.3
P10809_1060
5.3
P10809_1077
16.9
P10809_1098
7.1
MAIT T-cell nTPM: 14.0
Samples: 6
Max nTPM: 25.7
Min nTPM: 4.9
P10809_1006
25.7
P10809_1024
4.9
P10809_1043
19.6
P10809_1062
10.4
P10809_1083
10.9
P10809_1097
12.4
Memory CD4 T-cell nTPM: 17.9
Samples: 6
Max nTPM: 25.7
Min nTPM: 3.7
P10809_1014
17.3
P10809_1026
23.7
P10809_1045
25.7
P10809_1064
25.6
P10809_1086
11.3
P10809_1113
3.7
Memory CD8 T-cell nTPM: 17.8
Samples: 5
Max nTPM: 23.5
Min nTPM: 5.8
P10809_1012
20.6
P10809_1027
5.8
P10809_1046
20.0
P10809_1065
23.5
P10809_1111
19.3
Naive CD4 T-cell nTPM: 20.6
Samples: 6
Max nTPM: 28.9
Min nTPM: 12.5
P10809_1015
17.9
P10809_1030
23.4
P10809_1049
28.9
P10809_1068
20.7
P10809_1085
20.2
P10809_1112
12.5
Naive CD8 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 20.4
Min nTPM: 2.6
P10809_1016
13.1
P10809_1031
12.1
P10809_1050
17.2
P10809_1069
20.4
P10809_1087
2.6
P10809_1110
13.5
T-reg nTPM: 21.5
Samples: 6
Max nTPM: 42.7
Min nTPM: 3.3
P10809_1018
9.9
P10809_1037
25.5
P10809_1056
42.7
P10809_1075
26.5
P10809_1094
3.3
P10809_1106
21.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 62.5
Samples: 4
Max nTPM: 95.8
Min nTPM: 32.8
RHH5202_R3573
32.8
RHH5230_R3602
95.8
RHH5259_R3631
66.4
RHH5288_R3660
55.1
Effector memory CD8 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 78.1
Min nTPM: 34.4
RHH5203_R3574
39.7
RHH5231_R3603
78.1
RHH5260_R3632
77.6
RHH5289_R3661
34.4
MAIT T-cell nTPM: 49.2
Samples: 4
Max nTPM: 70.3
Min nTPM: 27.4
RHH5233_R3605
45.0
RHH5205_R3576
53.9
RHH5262_R3634
70.3
RHH5297_R3663
27.4
Memory CD4 T-cell TFH nTPM: 68.3
Samples: 4
Max nTPM: 90.3
Min nTPM: 42.3
RHH5300_R3666
90.3
RHH5236_R3608
76.0
RHH5265_R3637
64.5
RHH5208_R3579
42.3
Memory CD4 T-cell Th1 nTPM: 63.5
Samples: 4
Max nTPM: 107.8
Min nTPM: 26.6
RHH5210_R3581
26.6
RHH5302_R3668
42.5
RHH5238_R3610
107.8
RHH5267_R3639
77.1
Memory CD4 T-cell Th1/Th17 nTPM: 57.7
Samples: 4
Max nTPM: 81.3
Min nTPM: 38.8
RHH5303_R3669
38.8
RHH5211_R3582
43.2
RHH5239_R3611
81.3
RHH5268_R3640
67.5
Memory CD4 T-cell Th17 nTPM: 60.6
Samples: 4
Max nTPM: 111.1
Min nTPM: 36.9
RHH5304_R3670
36.9
RHH5212_R3583
56.8
RHH5240_R3612
37.7
RHH5269_R3641
111.1
Memory CD4 T-cell Th2 nTPM: 69.9
Samples: 4
Max nTPM: 83.8
Min nTPM: 60.2
RHH5305_R3671
63.5
RHH5213_R3584
71.9
RHH5241_R3613
60.2
RHH5270_R3642
83.8
Naive CD4 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 94.4
Min nTPM: 44.9
RHH5306_R3672
77.0
RHH5214_R3585
94.4
RHH5242_R3614
44.9
RHH5271_R3643
68.8
Naive CD8 T-cell nTPM: 70.5
Samples: 4
Max nTPM: 97.3
Min nTPM: 31.1
RHH5201_R3572
31.1
RHH5229_R3601
85.8
RHH5258_R3630
97.3
RHH5287_R3659
67.9
Non-Vd2 gdTCR nTPM: 67.3
Samples: 4
Max nTPM: 120.5
Min nTPM: 40.5
RHH5235_R3607
120.5
RHH5264_R3636
40.5
RHH5207_R3578
41.9
RHH5299_R3665
66.2
T-reg nTPM: 87.3
Samples: 4
Max nTPM: 103.7
Min nTPM: 62.7
RHH5301_R3667
62.7
RHH5237_R3609
87.0
RHH5266_R3638
103.7
RHH5209_R3580
95.7
Terminal effector memory CD4 T-cell nTPM: 77.5
Samples: 2
Max nTPM: 110.5
Min nTPM: 44.4
RHH5243_R3615
110.5
RHH5272_R3644
44.4
Terminal effector memory CD8 T-cell nTPM: 51.7
Samples: 4
Max nTPM: 59.6
Min nTPM: 41.1
RHH5232_R3604
55.7
RHH5204_R3575
50.4
RHH5261_R3633
59.6
RHH5296_R3662
41.1
Vd2 gdTCR nTPM: 54.6
Samples: 4
Max nTPM: 79.6
Min nTPM: 41.5
RHH5234_R3606
79.6
RHH5206_R3577
42.0
RHH5263_R3635
55.2
RHH5298_R3664
41.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
