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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.4
nTPM
Monaco:
254.0
nTPM
Schmiedel:
144.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.4
HPA sample
nTPM
gdT-cell nTPM: 29.1
Samples: 6
Max nTPM: 37.5
Min nTPM: 24.0
P10809_1007
24.0
P10809_1022
27.2
P10809_1041
27.5
P10809_1060
25.1
P10809_1077
37.5
P10809_1098
33.5
MAIT T-cell nTPM: 32.9
Samples: 6
Max nTPM: 43.6
Min nTPM: 24.9
P10809_1006
26.6
P10809_1024
27.6
P10809_1043
24.9
P10809_1062
36.8
P10809_1083
37.8
P10809_1097
43.6
Memory CD4 T-cell nTPM: 38.2
Samples: 6
Max nTPM: 55.2
Min nTPM: 23.8
P10809_1014
35.3
P10809_1026
23.8
P10809_1045
31.5
P10809_1064
38.4
P10809_1086
44.9
P10809_1113
55.2
Memory CD8 T-cell nTPM: 28.3
Samples: 5
Max nTPM: 37.9
Min nTPM: 20.1
P10809_1012
20.1
P10809_1027
26.0
P10809_1046
22.5
P10809_1065
35.1
P10809_1111
37.9
Naive CD4 T-cell nTPM: 22.0
Samples: 6
Max nTPM: 29.9
Min nTPM: 17.2
P10809_1015
23.0
P10809_1030
17.2
P10809_1049
17.4
P10809_1068
20.5
P10809_1085
29.9
P10809_1112
24.1
Naive CD8 T-cell nTPM: 24.8
Samples: 6
Max nTPM: 42.8
Min nTPM: 14.3
P10809_1016
14.3
P10809_1031
16.4
P10809_1050
21.1
P10809_1069
29.5
P10809_1087
42.8
P10809_1110
24.5
T-reg nTPM: 46.4
Samples: 6
Max nTPM: 58.4
Min nTPM: 34.4
P10809_1018
42.0
P10809_1037
44.3
P10809_1056
34.4
P10809_1075
58.4
P10809_1094
52.1
P10809_1106
47.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
254.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.6
Samples: 4
Max nTPM: 123.8
Min nTPM: 87.9
RHH5202_R3573
123.8
RHH5230_R3602
110.7
RHH5259_R3631
100.0
RHH5288_R3660
87.9
Effector memory CD8 T-cell nTPM: 147.9
Samples: 4
Max nTPM: 160.6
Min nTPM: 122.6
RHH5203_R3574
158.8
RHH5231_R3603
149.4
RHH5260_R3632
122.6
RHH5289_R3661
160.6
MAIT T-cell nTPM: 142.7
Samples: 4
Max nTPM: 156.9
Min nTPM: 120.8
RHH5233_R3605
156.9
RHH5205_R3576
149.7
RHH5262_R3634
143.3
RHH5297_R3663
120.8
Memory CD4 T-cell TFH nTPM: 131.9
Samples: 4
Max nTPM: 160.1
Min nTPM: 103.6
RHH5300_R3666
103.6
RHH5236_R3608
160.1
RHH5265_R3637
121.4
RHH5208_R3579
142.3
Memory CD4 T-cell Th1 nTPM: 81.8
Samples: 4
Max nTPM: 92.2
Min nTPM: 76.0
RHH5210_R3581
82.5
RHH5302_R3668
92.2
RHH5238_R3610
76.4
RHH5267_R3639
76.0
Memory CD4 T-cell Th1/Th17 nTPM: 174.5
Samples: 4
Max nTPM: 193.3
Min nTPM: 148.4
RHH5303_R3669
148.4
RHH5211_R3582
193.3
RHH5239_R3611
170.0
RHH5268_R3640
186.3
Memory CD4 T-cell Th17 nTPM: 254.0
Samples: 4
Max nTPM: 339.7
Min nTPM: 211.7
RHH5304_R3670
211.7
RHH5212_R3583
224.9
RHH5240_R3612
339.7
RHH5269_R3641
239.5
Memory CD4 T-cell Th2 nTPM: 118.0
Samples: 4
Max nTPM: 129.2
Min nTPM: 110.5
RHH5305_R3671
114.4
RHH5213_R3584
129.2
RHH5241_R3613
110.5
RHH5270_R3642
117.7
Naive CD4 T-cell nTPM: 81.1
Samples: 4
Max nTPM: 82.2
Min nTPM: 79.5
RHH5306_R3672
82.2
RHH5214_R3585
81.0
RHH5242_R3614
79.5
RHH5271_R3643
81.5
Naive CD8 T-cell nTPM: 69.1
Samples: 4
Max nTPM: 83.7
Min nTPM: 52.8
RHH5201_R3572
83.7
RHH5229_R3601
52.8
RHH5258_R3630
66.7
RHH5287_R3659
73.1
Non-Vd2 gdTCR nTPM: 166.6
Samples: 4
Max nTPM: 190.9
Min nTPM: 127.5
RHH5235_R3607
164.3
RHH5264_R3636
183.6
RHH5207_R3578
190.9
RHH5299_R3665
127.5
T-reg nTPM: 108.7
Samples: 4
Max nTPM: 114.4
Min nTPM: 99.3
RHH5301_R3667
99.3
RHH5237_R3609
110.7
RHH5266_R3638
110.2
RHH5209_R3580
114.4
Terminal effector memory CD4 T-cell nTPM: 140.3
Samples: 2
Max nTPM: 147.6
Min nTPM: 133.0
RHH5243_R3615
147.6
RHH5272_R3644
133.0
Terminal effector memory CD8 T-cell nTPM: 135.7
Samples: 4
Max nTPM: 162.5
Min nTPM: 111.4
RHH5232_R3604
156.9
RHH5204_R3575
111.4
RHH5261_R3633
162.5
RHH5296_R3662
112.1
Vd2 gdTCR nTPM: 134.8
Samples: 4
Max nTPM: 190.6
Min nTPM: 91.1
RHH5234_R3606
113.8
RHH5206_R3577
190.6
RHH5263_R3635
143.7
RHH5298_R3664
91.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
