HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:38.8 nTPM
HPA Brain:58.3 nTPM
GTEx:38.8 nTPM
FANTOM5:120.0 Scaled Tags Per Million
Pig:48.9 nTPM
Mouse:47.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029761Antibody HPA029762Antibody HPA029763
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.3
Sample id Sample description nTPM
Hippocampus
nTPM: 56.2
1898 Male, age 80, left hemisphere 63.3
2529 Female, age 94, left hemisphere 57.8
2621 Female, age 67, right hemisphere 55.6
2148 Female, age 91, left hemisphere 54.5
1855 Male, age 76, left hemisphere 53.3
1911 Female, age 85, right hemisphere 52.4
Dentate gyrus
nTPM: 54.5
2010 Male, age 76, both hemispheres 63.2
2530 Female, age 94, left hemisphere 62.6
2528 Male, age 74, both hemispheres 52.6
1927 Female, age 91, both hemispheres 51.0
2246 Female, age 85, both hemispheres 50.9
2531 Female, age 67, both hemispheres 47.0
Entorhinal gyrus
nTPM: 52.9
2117 Female, age 91, right hemisphere 60.5
1787 Male, age 76, left hemisphere 56.5
1938 Female, age 85, left hemisphere 54.9
2686 Male, age 75, right hemisphere 49.9
2764 Male, age 80, right hemisphere 48.9
2613 Female, age 94, left hemisphere 46.8
Hippocampus, CA1
nTPM: 52.4
2749 Male, age 80, left hemisphere 58.1
2527 Male, age 74, both hemispheres 57.1
1873 Female, age 85, both hemispheres 55.4
2045 Male, age 76, both hemispheres 49.6
2082 Female, age 91, right hemisphere 41.9
Hippocampus, CA2
nTPM: 54.4
1940 Female, age 85, left hemisphere 58.4
1892 Male, age 76, both hemispheres 57.0
2437 Female, age 94, left hemisphere 56.6
2249 Male, age 74, both hemispheres 55.6
1963 Male, age 80, left hemisphere 52.9
2113 Female, age 91, right hemisphere 45.9
Hippocampus, CA3
nTPM: 54.0
1867 Male, age 76, both hemispheres 62.5
1891 Female, age 85, both hemispheres 56.7
2436 Male, age 74, both hemispheres 56.3
2137 Male, age 80, left hemisphere 54.0
2620 Female, age 94, left hemisphere 49.4
2861 Female, age 67, both hemispheres 45.2
Parahippocampal cortex
nTPM: 53.6
1850 Male, age 80, both hemispheres 61.7
2018 Male, age 76, both hemispheres 57.5
2245 Female, age 91, both hemispheres 57.3
1990 Female, age 91, right hemisphere 56.4
1933 Female, age 85, both hemispheres 55.0
2532 Female, age 72, left hemisphere 53.6
2250 Female, age 67, right hemisphere 53.2
2692 Male, age 74, both hemispheres 50.1
2693 Female, age 94, both hemispheres 47.9
2622 Female, age 67, right hemisphere 43.5
Perirhinal gyrus
nTPM: 55.3
1841 Female, age 85, right hemisphere 57.8
2521 Female, age 94, right hemisphere 56.8
1847 Female, age 91, left hemisphere 56.0
1794 Male, age 80, right hemisphere 55.5
2848 Male, age 76, right hemisphere 50.3
Subiculum
nTPM: 58.3
2042 Male, age 76, both hemispheres 67.3
1901 Male, age 80, both hemispheres 60.3
2438 Female, age 94, left hemisphere 59.7
1977 Female, age 85, both hemispheres 55.5
2729 Female, age 91, right hemisphere 54.3
2619 Male, age 74, both hemispheres 52.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.8
Samples: 197

Max nTPM: 85.6
Min nTPM: 25.1
Std nTPM: 8.9
Median nTPM: 37.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 85.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 82.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 74.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 63.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 63.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 61.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 60.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 59.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 55.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 54.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 54.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.0
FF:10153-102I9 76 years, female 126.8
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.9
Pig sample Sample description nTPM
Subiculum
nTPM: 47.5
Samples: 4

Max nTPM: 55.3
Min nTPM: 41.8
Sample A Female 55.3
Sample B Female 44.6
Sample C Male 41.8
Sample D Male 48.1
Dorsal hippocampus
nTPM: 48.9
Samples: 4

Max nTPM: 55.6
Min nTPM: 43.9
Sample A Female 55.6
Sample B Female 45.4
Sample C Male 50.8
Sample D Male 43.9
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 53.8
Min nTPM: 37.8
Sample A Female 51.9
Sample B Female 53.8
Sample C Male 49.1
Sample D Male 37.8
Ventral hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 45.7
Min nTPM: 37.2
Sample A Female 45.7
Sample B Female 37.2
Sample C Male 44.5
Sample D Male 39.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.5
Samples: 4

Max nTPM: 51.9
Min nTPM: 43.3
Sample A Male 46.3
Sample B Male 48.6
Sample C Female 43.3
Sample D Female 51.9
Hippocampal formation
nTPM: 43.1
Samples: 4

Max nTPM: 46.9
Min nTPM: 40.4
Sample A Male 42.1
Sample B Male 42.8
Sample C Female 46.9
Sample D Female 40.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org