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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.8
nTPM
Monaco:
90.0
nTPM
Schmiedel:
48.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.8
HPA sample
nTPM
gdT-cell nTPM: 82.5
Samples: 6
Max nTPM: 93.7
Min nTPM: 67.6
P10809_1007
79.0
P10809_1022
89.3
P10809_1041
79.4
P10809_1060
67.6
P10809_1077
93.7
P10809_1098
85.8
MAIT T-cell nTPM: 89.9
Samples: 6
Max nTPM: 109.9
Min nTPM: 74.5
P10809_1006
74.5
P10809_1024
86.0
P10809_1043
109.9
P10809_1062
76.1
P10809_1083
94.7
P10809_1097
98.0
Memory CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 93.3
Min nTPM: 65.7
P10809_1014
76.1
P10809_1026
93.3
P10809_1045
65.7
P10809_1064
72.5
P10809_1086
76.9
P10809_1113
79.5
Memory CD8 T-cell nTPM: 77.9
Samples: 5
Max nTPM: 93.9
Min nTPM: 68.1
P10809_1012
68.9
P10809_1027
79.5
P10809_1046
93.9
P10809_1065
68.1
P10809_1111
79.0
Naive CD4 T-cell nTPM: 95.8
Samples: 6
Max nTPM: 126.7
Min nTPM: 75.9
P10809_1015
75.9
P10809_1030
99.4
P10809_1049
126.7
P10809_1068
90.9
P10809_1085
103.4
P10809_1112
78.4
Naive CD8 T-cell nTPM: 84.2
Samples: 6
Max nTPM: 88.6
Min nTPM: 78.9
P10809_1016
85.0
P10809_1031
78.9
P10809_1050
83.7
P10809_1069
87.2
P10809_1087
88.6
P10809_1110
81.9
T-reg nTPM: 95.3
Samples: 6
Max nTPM: 112.9
Min nTPM: 63.4
P10809_1018
104.9
P10809_1037
96.3
P10809_1056
95.0
P10809_1075
63.4
P10809_1094
112.9
P10809_1106
99.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 70.8
Samples: 4
Max nTPM: 98.0
Min nTPM: 51.0
RHH5202_R3573
75.2
RHH5230_R3602
59.0
RHH5259_R3631
51.0
RHH5288_R3660
98.0
Effector memory CD8 T-cell nTPM: 66.5
Samples: 4
Max nTPM: 88.8
Min nTPM: 47.8
RHH5203_R3574
73.3
RHH5231_R3603
88.8
RHH5260_R3632
47.8
RHH5289_R3661
56.1
MAIT T-cell nTPM: 62.8
Samples: 4
Max nTPM: 75.4
Min nTPM: 44.3
RHH5233_R3605
74.0
RHH5205_R3576
44.3
RHH5262_R3634
57.4
RHH5297_R3663
75.4
Memory CD4 T-cell TFH nTPM: 87.7
Samples: 4
Max nTPM: 143.9
Min nTPM: 44.8
RHH5300_R3666
84.3
RHH5236_R3608
143.9
RHH5265_R3637
44.8
RHH5208_R3579
77.9
Memory CD4 T-cell Th1 nTPM: 64.1
Samples: 4
Max nTPM: 108.5
Min nTPM: 44.8
RHH5210_R3581
56.3
RHH5302_R3668
108.5
RHH5238_R3610
46.8
RHH5267_R3639
44.8
Memory CD4 T-cell Th1/Th17 nTPM: 74.5
Samples: 4
Max nTPM: 118.6
Min nTPM: 28.7
RHH5303_R3669
118.6
RHH5211_R3582
91.0
RHH5239_R3611
28.7
RHH5268_R3640
59.6
Memory CD4 T-cell Th17 nTPM: 60.8
Samples: 4
Max nTPM: 106.3
Min nTPM: 39.9
RHH5304_R3670
55.7
RHH5212_R3583
106.3
RHH5240_R3612
39.9
RHH5269_R3641
41.3
Memory CD4 T-cell Th2 nTPM: 60.5
Samples: 4
Max nTPM: 98.1
Min nTPM: 33.8
RHH5305_R3671
51.6
RHH5213_R3584
58.5
RHH5241_R3613
98.1
RHH5270_R3642
33.8
Naive CD4 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 105.6
Min nTPM: 34.9
RHH5306_R3672
65.4
RHH5214_R3585
105.6
RHH5242_R3614
58.7
RHH5271_R3643
34.9
Naive CD8 T-cell nTPM: 60.1
Samples: 4
Max nTPM: 81.2
Min nTPM: 33.0
RHH5201_R3572
72.4
RHH5229_R3601
33.0
RHH5258_R3630
81.2
RHH5287_R3659
53.9
Non-Vd2 gdTCR nTPM: 84.7
Samples: 4
Max nTPM: 113.8
Min nTPM: 43.8
RHH5235_R3607
43.8
RHH5264_R3636
109.5
RHH5207_R3578
71.7
RHH5299_R3665
113.8
T-reg nTPM: 77.9
Samples: 4
Max nTPM: 107.8
Min nTPM: 44.5
RHH5301_R3667
90.6
RHH5237_R3609
107.8
RHH5266_R3638
44.5
RHH5209_R3580
68.6
Terminal effector memory CD4 T-cell nTPM: 64.2
Samples: 2
Max nTPM: 85.9
Min nTPM: 42.5
RHH5243_R3615
42.5
RHH5272_R3644
85.9
Terminal effector memory CD8 T-cell nTPM: 89.1
Samples: 4
Max nTPM: 134.6
Min nTPM: 58.3
RHH5232_R3604
68.0
RHH5204_R3575
134.6
RHH5261_R3633
58.3
RHH5296_R3662
95.4
Vd2 gdTCR nTPM: 90.0
Samples: 4
Max nTPM: 140.2
Min nTPM: 44.7
RHH5234_R3606
73.0
RHH5206_R3577
140.2
RHH5263_R3635
44.7
RHH5298_R3664
102.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
