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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.3
nTPM
Monaco:
25.5
nTPM
Schmiedel:
28.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.3
HPA sample
nTPM
gdT-cell nTPM: 26.1
Samples: 6
Max nTPM: 45.2
Min nTPM: 9.8
P10809_1007
9.8
P10809_1022
31.9
P10809_1041
45.2
P10809_1060
26.1
P10809_1077
19.2
P10809_1098
24.1
MAIT T-cell nTPM: 29.5
Samples: 6
Max nTPM: 48.7
Min nTPM: 17.5
P10809_1006
17.5
P10809_1024
33.8
P10809_1043
48.7
P10809_1062
21.7
P10809_1083
24.1
P10809_1097
31.4
Memory CD4 T-cell nTPM: 26.7
Samples: 6
Max nTPM: 39.3
Min nTPM: 12.6
P10809_1014
12.6
P10809_1026
22.3
P10809_1045
39.3
P10809_1064
27.5
P10809_1086
29.5
P10809_1113
29.0
Memory CD8 T-cell nTPM: 27.5
Samples: 5
Max nTPM: 39.4
Min nTPM: 16.7
P10809_1012
16.7
P10809_1027
26.3
P10809_1046
39.4
P10809_1065
18.5
P10809_1111
36.4
Naive CD4 T-cell nTPM: 35.3
Samples: 6
Max nTPM: 62.2
Min nTPM: 13.2
P10809_1015
13.2
P10809_1030
38.2
P10809_1049
62.2
P10809_1068
37.2
P10809_1085
29.5
P10809_1112
31.6
Naive CD8 T-cell nTPM: 27.8
Samples: 6
Max nTPM: 35.8
Min nTPM: 13.1
P10809_1016
13.1
P10809_1031
32.7
P10809_1050
33.7
P10809_1069
35.8
P10809_1087
26.7
P10809_1110
24.6
T-reg nTPM: 30.8
Samples: 6
Max nTPM: 41.0
Min nTPM: 16.4
P10809_1018
16.4
P10809_1037
38.4
P10809_1056
41.0
P10809_1075
21.1
P10809_1094
29.3
P10809_1106
38.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.3
Samples: 4
Max nTPM: 26.5
Min nTPM: 13.2
RHH5202_R3573
26.5
RHH5230_R3602
14.1
RHH5259_R3631
13.2
RHH5288_R3660
19.3
Effector memory CD8 T-cell nTPM: 22.1
Samples: 4
Max nTPM: 28.8
Min nTPM: 14.2
RHH5203_R3574
28.8
RHH5231_R3603
14.2
RHH5260_R3632
21.8
RHH5289_R3661
23.4
MAIT T-cell nTPM: 16.6
Samples: 4
Max nTPM: 21.3
Min nTPM: 12.2
RHH5233_R3605
21.3
RHH5205_R3576
12.2
RHH5262_R3634
16.4
RHH5297_R3663
16.6
Memory CD4 T-cell TFH nTPM: 21.7
Samples: 4
Max nTPM: 31.9
Min nTPM: 14.4
RHH5300_R3666
17.8
RHH5236_R3608
31.9
RHH5265_R3637
14.4
RHH5208_R3579
22.8
Memory CD4 T-cell Th1 nTPM: 14.4
Samples: 4
Max nTPM: 23.3
Min nTPM: 7.2
RHH5210_R3581
15.9
RHH5302_R3668
23.3
RHH5238_R3610
11.2
RHH5267_R3639
7.2
Memory CD4 T-cell Th1/Th17 nTPM: 17.6
Samples: 4
Max nTPM: 22.4
Min nTPM: 13.8
RHH5303_R3669
20.0
RHH5211_R3582
22.4
RHH5239_R3611
13.8
RHH5268_R3640
14.3
Memory CD4 T-cell Th17 nTPM: 19.9
Samples: 4
Max nTPM: 32.5
Min nTPM: 11.7
RHH5304_R3670
11.7
RHH5212_R3583
32.5
RHH5240_R3612
17.6
RHH5269_R3641
17.6
Memory CD4 T-cell Th2 nTPM: 15.6
Samples: 4
Max nTPM: 21.1
Min nTPM: 9.6
RHH5305_R3671
16.7
RHH5213_R3584
14.9
RHH5241_R3613
9.6
RHH5270_R3642
21.1
Naive CD4 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 26.8
Min nTPM: 15.1
RHH5306_R3672
20.3
RHH5214_R3585
15.1
RHH5242_R3614
20.3
RHH5271_R3643
26.8
Naive CD8 T-cell nTPM: 17.2
Samples: 4
Max nTPM: 25.9
Min nTPM: 11.7
RHH5201_R3572
25.9
RHH5229_R3601
11.7
RHH5258_R3630
14.3
RHH5287_R3659
17.0
Non-Vd2 gdTCR nTPM: 24.1
Samples: 4
Max nTPM: 29.0
Min nTPM: 18.7
RHH5235_R3607
29.0
RHH5264_R3636
22.9
RHH5207_R3578
25.7
RHH5299_R3665
18.7
T-reg nTPM: 23.0
Samples: 4
Max nTPM: 30.3
Min nTPM: 17.4
RHH5301_R3667
17.4
RHH5237_R3609
24.8
RHH5266_R3638
30.3
RHH5209_R3580
19.3
Terminal effector memory CD4 T-cell nTPM: 25.5
Samples: 2
Max nTPM: 33.1
Min nTPM: 17.8
RHH5243_R3615
33.1
RHH5272_R3644
17.8
Terminal effector memory CD8 T-cell nTPM: 17.4
Samples: 4
Max nTPM: 21.9
Min nTPM: 13.1
RHH5232_R3604
21.9
RHH5204_R3575
14.7
RHH5261_R3633
20.0
RHH5296_R3662
13.1
Vd2 gdTCR nTPM: 13.3
Samples: 4
Max nTPM: 19.9
Min nTPM: 6.7
RHH5234_R3606
19.9
RHH5206_R3577
12.8
RHH5263_R3635
13.8
RHH5298_R3664
6.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
