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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
299.7
nTPM
FANTOM5:
19.9
Scaled Tags Per Million
Pig:
292.3
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
299.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 261.3
2188
Female, age 91, both hemispheres
292.0
2301
Female, age 85, both hemispheres
277.6
2090
Male, age 80, both hemispheres
256.4
1984
Male, age 76, both hemispheres
219.3
Dorsal cochlear nucleus nTPM: 262.3
2802
Male, age 74, right hemisphere
311.9
2187
Female, age 91, both hemispheres
283.3
2058
Male, age 76, both hemispheres
245.9
2378
Male, age 80, both hemispheres
245.7
2370
Male, age 61, both hemispheres
224.6
Dorsal tegmental nucleus nTPM: 273.5
2326
Male, age 74, both hemispheres
296.4
2083
Male, age 80, both hemispheres
284.9
2358
Male, age 61, both hemispheres
270.4
1936
Male, age 76, left hemisphere
242.3
Dorsolateral tegmental area nTPM: 263.8
2337
Male, age 61, both hemispheres
290.3
2654
Male, age 80, both hemispheres
266.0
2751
Female, age 85, both hemispheres
265.8
2360
Male, age 74, both hemispheres
264.0
2141
Male, age 76, both hemispheres
232.7
Kolliker-Fuse nucleus nTPM: 299.7
2315
Male, age 76, right hemisphere
366.5
2793
Female, age 91, left hemisphere
284.2
2163
Male, age 80, both hemispheres
248.3
Lateral lemniscal nuclei nTPM: 239.1
2169
Male, age 76, both hemispheres
253.3
2320
Female, age 91, left hemisphere
252.4
2746
Female, age 85, left hemisphere
250.3
2036
Male, age 80, both hemispheres
229.4
2453
Male, age 74, right hemisphere
210.0
Lateral parabrachial nucleus nTPM: 268.3
2792
Male, age 76, both hemispheres
350.1
2139
Female, age 85, right hemisphere
277.4
2013
Male, age 80, both hemispheres
266.7
2790
Male, age 61, both hemispheres
179.1
Lateral vestibular nucleus nTPM: 244.7
2311
Male, age 80, both hemispheres
264.6
2184
Male, age 76, both hemispheres
224.8
Locus coeruleus nTPM: 251.1
2014
Male, age 55, unknown
284.6
2788
Male, age 74, unknown
267.1
2720
Male, age 74, both hemispheres
262.7
2123
Female, age 91, both hemispheres
256.0
2317
Female, age 72, unknown
243.0
2162
Male, age 80, both hemispheres
229.7
1980
Male, age 76, both hemispheres
214.3
Medial parabrachial nucleus nTPM: 252.8
2170
Female, age 91, both hemispheres
283.7
2854
Male, age 80, both hemispheres
282.7
2463
Female, age 85, right hemisphere
244.4
2786
Male, age 76, both hemispheres
241.5
2156
Male, age 61, both hemispheres
211.7
Medial periolivary nuclei nTPM: 249.5
2791
Male, age 74, right hemisphere
261.4
2063
Male, age 76, both hemispheres
261.0
2081
Male, age 80, both hemispheres
247.2
2171
Female, age 85, both hemispheres
243.3
2458
Female, age 91, both hemispheres
234.8
Motor facial nucleus nTPM: 250.8
2697
Female, age 85, both hemispheres
272.7
2365
Male, age 74, right hemisphere
260.6
2062
Male, age 76, both hemispheres
259.4
2126
Male, age 61, both hemispheres
250.9
2795
Female, age 91, both hemispheres
241.2
2327
Male, age 80, both hemispheres
220.2
Motor trigeminal nucleus nTPM: 239.9
2309
Male, age 76, both hemispheres
245.9
2560
Male, age 74, both hemispheres
242.7
2079
Male, age 80, both hemispheres
238.9
2321
Female, age 91, both hemispheres
237.8
2335
Male, age 61, both hemispheres
234.2
Nuclei of the trapezoid body nTPM: 242.7
1983
Male, age 76, both hemispheres
257.7
2159
Male, age 61, both hemispheres
257.6
2166
Male, age 80, both hemispheres
245.9
2735
Female, age 85, both hemispheres
236.1
2368
Female, age 91, both hemispheres
216.2
Nucleus raphe magnus nTPM: 244.7
2160
Male, age 61, both hemispheres
259.1
2459
Female, age 91, both hemispheres
249.6
2051
Male, age 76, both hemispheres
244.4
2328
Male, age 80, both hemispheres
240.9
2455
Male, age 74, both hemispheres
237.6
2172
Female, age 85, both hemispheres
236.8
Paramedian reticular nucleus nTPM: 251.3
2050
Female, age 85, both hemispheres
265.3
2052
Male, age 76, both hemispheres
260.1
2313
Male, age 61, both hemispheres
242.6
2057
Male, age 80, both hemispheres
237.4
Pedunculopontine tegmental nucleus nTPM: 262.9
2338
Male, age 61, both hemispheres
293.7
2334
Male, age 80, both hemispheres
262.6
1921
Female, age 85, both hemispheres
232.4
Pontine nuclei nTPM: 263.5
2454
Male, age 74, left hemisphere
297.8
2319
Female, age 91, both hemispheres
282.2
2787
Female, age 85, both hemispheres
274.8
2109
Female, age 72, unknown
261.8
1863
Male, age 55, unknown
259.6
2727
Male, age 61, right hemisphere
256.2
2115
Male, age 80, left hemisphere
238.8
1968
Male, age 76, left hemisphere
237.0
Pontine raphe nucleus nTPM: 265.1
2122
Female, age 85, midline
286.6
2853
Male, age 76, midline
243.6
Posteroventral cochlear nucleus nTPM: 267.1
2135
Female, age 91, both hemispheres
294.5
2341
Male, age 80, both hemispheres
289.1
2752
Female, age 85, both hemispheres
260.3
2070
Male, age 76, both hemispheres
253.3
2371
Male, age 61, both hemispheres
238.0
Principal sensory trigeminal nucleus nTPM: 249.5
2367
Female, age 91, left hemisphere
258.3
2324
Male, age 76, both hemispheres
252.2
2158
Male, age 61, both hemispheres
246.1
2008
Male, age 80, left hemisphere
241.2
Reticular pontine nucleus, caudal nTPM: 253.9
2092
Male, age 76, both hemispheres
280.4
2559
Male, age 74, both hemispheres
253.6
2457
Female, age 91, both hemispheres
251.7
2332
Male, age 80, right hemisphere
229.7
Reticular pontine nucleus, oral nTPM: 263.2
2366
Female, age 91, both hemispheres
276.6
1939
Male, age 80, both hemispheres
265.3
2012
Female, age 85, both hemispheres
262.4
2167
Male, age 76, both hemispheres
262.2
2361
Male, age 74, both hemispheres
249.7
Reticulotegmental nucleus nTPM: 249.3
2322
Female, age 91, both hemispheres
259.1
2452
Male, age 74, both hemispheres
249.3
2333
Male, age 80, both hemispheres
244.6
2325
Male, age 76, both hemispheres
244.1
Spinal trigeminal nucleus, oral nTPM: 227.6
2164
Male, age 80, both hemispheres
230.4
1978
Male, age 76, both hemispheres
226.4
2737
Female, age 85, both hemispheres
226.0
Subcoeruleus area nTPM: 248.5
2369
Female, age 85, left hemisphere
275.1
2451
Male, age 74, both hemispheres
255.7
1958
Male, age 80, both hemispheres
255.5
2323
Female, age 91, left hemisphere
240.3
2089
Male, age 76, left hemisphere
215.8
Superior olive nTPM: 257.1
2020
Male, age 76, both hemispheres
272.9
2364
Male, age 74, right hemisphere
268.6
1875
Female, age 85, both hemispheres
259.0
2329
Male, age 80, right hemisphere
255.4
2561
Female, age 91, both hemispheres
229.7
Ventral periolivary nuclei nTPM: 251.3
2023
Male, age 76, both hemispheres
278.2
2130
Female, age 85, both hemispheres
258.6
2165
Male, age 80, both hemispheres
245.1
2794
Female, age 91, left hemisphere
223.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 248.3
2359
Male, age 61, both hemispheres
275.1
2840
Female, age 85, both hemispheres
265.5
1959
Male, age 76, both hemispheres
246.2
2161
Male, age 80, both hemispheres
244.5
2449
Male, age 74, both hemispheres
229.7
2456
Female, age 91, both hemispheres
229.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
