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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.7
nTPM
Monaco:
117.4
nTPM
Schmiedel:
176.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.7
HPA sample
nTPM
gdT-cell nTPM: 29.7
Samples: 6
Max nTPM: 37.0
Min nTPM: 24.4
P10809_1007
25.9
P10809_1022
33.8
P10809_1041
37.0
P10809_1060
31.0
P10809_1077
24.4
P10809_1098
25.8
MAIT T-cell nTPM: 34.7
Samples: 6
Max nTPM: 39.9
Min nTPM: 27.5
P10809_1006
39.9
P10809_1024
34.7
P10809_1043
27.5
P10809_1062
35.3
P10809_1083
33.9
P10809_1097
37.0
Memory CD4 T-cell nTPM: 28.0
Samples: 6
Max nTPM: 33.1
Min nTPM: 24.1
P10809_1014
29.3
P10809_1026
25.2
P10809_1045
33.1
P10809_1064
24.1
P10809_1086
28.6
P10809_1113
27.5
Memory CD8 T-cell nTPM: 33.1
Samples: 5
Max nTPM: 36.5
Min nTPM: 31.5
P10809_1012
32.2
P10809_1027
36.5
P10809_1046
31.8
P10809_1065
31.5
P10809_1111
33.7
Naive CD4 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 35.5
Min nTPM: 27.8
P10809_1015
31.6
P10809_1030
31.8
P10809_1049
29.1
P10809_1068
27.8
P10809_1085
32.5
P10809_1112
35.5
Naive CD8 T-cell nTPM: 32.3
Samples: 6
Max nTPM: 41.3
Min nTPM: 26.3
P10809_1016
28.4
P10809_1031
41.3
P10809_1050
34.2
P10809_1069
26.3
P10809_1087
31.5
P10809_1110
32.1
T-reg nTPM: 28.4
Samples: 6
Max nTPM: 34.9
Min nTPM: 18.9
P10809_1018
34.9
P10809_1037
25.2
P10809_1056
18.9
P10809_1075
34.5
P10809_1094
22.8
P10809_1106
34.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 93.4
Samples: 4
Max nTPM: 111.1
Min nTPM: 78.2
RHH5202_R3573
84.1
RHH5230_R3602
78.2
RHH5259_R3631
111.1
RHH5288_R3660
100.1
Effector memory CD8 T-cell nTPM: 103.5
Samples: 4
Max nTPM: 113.4
Min nTPM: 96.6
RHH5203_R3574
101.2
RHH5231_R3603
96.6
RHH5260_R3632
102.8
RHH5289_R3661
113.4
MAIT T-cell nTPM: 99.6
Samples: 4
Max nTPM: 116.9
Min nTPM: 88.8
RHH5233_R3605
116.9
RHH5205_R3576
93.5
RHH5262_R3634
99.1
RHH5297_R3663
88.8
Memory CD4 T-cell TFH nTPM: 104.4
Samples: 4
Max nTPM: 127.9
Min nTPM: 89.1
RHH5300_R3666
89.1
RHH5236_R3608
127.9
RHH5265_R3637
95.4
RHH5208_R3579
105.1
Memory CD4 T-cell Th1 nTPM: 96.9
Samples: 4
Max nTPM: 123.5
Min nTPM: 81.5
RHH5210_R3581
96.0
RHH5302_R3668
81.5
RHH5238_R3610
123.5
RHH5267_R3639
86.6
Memory CD4 T-cell Th1/Th17 nTPM: 100.4
Samples: 4
Max nTPM: 124.0
Min nTPM: 74.6
RHH5303_R3669
107.6
RHH5211_R3582
95.3
RHH5239_R3611
124.0
RHH5268_R3640
74.6
Memory CD4 T-cell Th17 nTPM: 105.1
Samples: 4
Max nTPM: 116.8
Min nTPM: 93.3
RHH5304_R3670
96.4
RHH5212_R3583
114.0
RHH5240_R3612
116.8
RHH5269_R3641
93.3
Memory CD4 T-cell Th2 nTPM: 102.7
Samples: 4
Max nTPM: 110.7
Min nTPM: 97.6
RHH5305_R3671
101.4
RHH5213_R3584
101.0
RHH5241_R3613
110.7
RHH5270_R3642
97.6
Naive CD4 T-cell nTPM: 94.5
Samples: 4
Max nTPM: 104.1
Min nTPM: 82.3
RHH5306_R3672
91.0
RHH5214_R3585
82.3
RHH5242_R3614
104.1
RHH5271_R3643
100.7
Naive CD8 T-cell nTPM: 114.3
Samples: 4
Max nTPM: 139.4
Min nTPM: 104.2
RHH5201_R3572
104.2
RHH5229_R3601
139.4
RHH5258_R3630
107.4
RHH5287_R3659
106.3
Non-Vd2 gdTCR nTPM: 109.6
Samples: 4
Max nTPM: 126.1
Min nTPM: 85.8
RHH5235_R3607
110.6
RHH5264_R3636
126.1
RHH5207_R3578
115.7
RHH5299_R3665
85.8
T-reg nTPM: 95.2
Samples: 4
Max nTPM: 97.3
Min nTPM: 91.9
RHH5301_R3667
91.9
RHH5237_R3609
95.1
RHH5266_R3638
96.3
RHH5209_R3580
97.3
Terminal effector memory CD4 T-cell nTPM: 117.4
Samples: 2
Max nTPM: 119.8
Min nTPM: 115.0
RHH5243_R3615
115.0
RHH5272_R3644
119.8
Terminal effector memory CD8 T-cell nTPM: 110.5
Samples: 4
Max nTPM: 131.1
Min nTPM: 91.9
RHH5232_R3604
131.1
RHH5204_R3575
91.9
RHH5261_R3633
101.2
RHH5296_R3662
117.9
Vd2 gdTCR nTPM: 94.3
Samples: 4
Max nTPM: 103.0
Min nTPM: 81.7
RHH5234_R3606
81.7
RHH5206_R3577
94.3
RHH5263_R3635
103.0
RHH5298_R3664
98.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
