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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.3
nTPM
Monaco:
17.3
nTPM
Schmiedel:
14.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.3
HPA sample
nTPM
gdT-cell nTPM: 13.4
Samples: 6
Max nTPM: 20.0
Min nTPM: 9.5
P10809_1007
9.5
P10809_1022
10.9
P10809_1041
20.0
P10809_1060
13.3
P10809_1077
11.9
P10809_1098
14.7
MAIT T-cell nTPM: 9.4
Samples: 6
Max nTPM: 14.3
Min nTPM: 3.4
P10809_1006
3.4
P10809_1024
14.3
P10809_1043
10.9
P10809_1062
5.5
P10809_1083
9.6
P10809_1097
12.5
Memory CD4 T-cell nTPM: 12.2
Samples: 6
Max nTPM: 13.7
Min nTPM: 9.9
P10809_1014
13.7
P10809_1026
9.9
P10809_1045
12.9
P10809_1064
12.2
P10809_1086
13.5
P10809_1113
11.2
Memory CD8 T-cell nTPM: 13.3
Samples: 5
Max nTPM: 17.6
Min nTPM: 7.5
P10809_1012
9.9
P10809_1027
17.6
P10809_1046
7.5
P10809_1065
16.3
P10809_1111
15.2
Naive CD4 T-cell nTPM: 13.3
Samples: 6
Max nTPM: 16.0
Min nTPM: 10.3
P10809_1015
10.3
P10809_1030
12.3
P10809_1049
15.1
P10809_1068
12.9
P10809_1085
16.0
P10809_1112
12.9
Naive CD8 T-cell nTPM: 14.3
Samples: 6
Max nTPM: 29.0
Min nTPM: 9.0
P10809_1016
9.0
P10809_1031
29.0
P10809_1050
11.4
P10809_1069
9.5
P10809_1087
15.2
P10809_1110
11.9
T-reg nTPM: 11.3
Samples: 6
Max nTPM: 17.9
Min nTPM: 5.6
P10809_1018
8.3
P10809_1037
13.4
P10809_1056
7.5
P10809_1075
5.6
P10809_1094
17.9
P10809_1106
15.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.6
Samples: 4
Max nTPM: 18.8
Min nTPM: 8.1
RHH5202_R3573
14.8
RHH5230_R3602
8.1
RHH5259_R3631
8.7
RHH5288_R3660
18.8
Effector memory CD8 T-cell nTPM: 15.1
Samples: 4
Max nTPM: 25.0
Min nTPM: 9.6
RHH5203_R3574
25.0
RHH5231_R3603
14.5
RHH5260_R3632
9.6
RHH5289_R3661
11.3
MAIT T-cell nTPM: 15.8
Samples: 4
Max nTPM: 20.9
Min nTPM: 8.7
RHH5233_R3605
14.9
RHH5205_R3576
8.7
RHH5262_R3634
20.9
RHH5297_R3663
18.7
Memory CD4 T-cell TFH nTPM: 15.6
Samples: 4
Max nTPM: 25.5
Min nTPM: 8.6
RHH5300_R3666
11.5
RHH5236_R3608
8.6
RHH5265_R3637
16.6
RHH5208_R3579
25.5
Memory CD4 T-cell Th1 nTPM: 13.7
Samples: 4
Max nTPM: 23.8
Min nTPM: 7.1
RHH5210_R3581
23.8
RHH5302_R3668
14.0
RHH5238_R3610
9.7
RHH5267_R3639
7.1
Memory CD4 T-cell Th1/Th17 nTPM: 14.0
Samples: 4
Max nTPM: 24.8
Min nTPM: 6.5
RHH5303_R3669
24.8
RHH5211_R3582
6.5
RHH5239_R3611
10.8
RHH5268_R3640
14.0
Memory CD4 T-cell Th17 nTPM: 14.1
Samples: 4
Max nTPM: 19.1
Min nTPM: 7.0
RHH5304_R3670
19.1
RHH5212_R3583
18.3
RHH5240_R3612
7.0
RHH5269_R3641
11.8
Memory CD4 T-cell Th2 nTPM: 14.4
Samples: 4
Max nTPM: 22.6
Min nTPM: 8.1
RHH5305_R3671
15.0
RHH5213_R3584
12.0
RHH5241_R3613
22.6
RHH5270_R3642
8.1
Naive CD4 T-cell nTPM: 14.8
Samples: 4
Max nTPM: 18.9
Min nTPM: 11.1
RHH5306_R3672
15.3
RHH5214_R3585
18.9
RHH5242_R3614
11.1
RHH5271_R3643
13.7
Naive CD8 T-cell nTPM: 16.0
Samples: 4
Max nTPM: 23.0
Min nTPM: 12.2
RHH5201_R3572
12.2
RHH5229_R3601
12.8
RHH5258_R3630
15.9
RHH5287_R3659
23.0
Non-Vd2 gdTCR nTPM: 13.5
Samples: 4
Max nTPM: 16.6
Min nTPM: 10.2
RHH5235_R3607
10.2
RHH5264_R3636
16.1
RHH5207_R3578
16.6
RHH5299_R3665
11.2
T-reg nTPM: 9.7
Samples: 4
Max nTPM: 12.9
Min nTPM: 6.2
RHH5301_R3667
7.6
RHH5237_R3609
12.9
RHH5266_R3638
6.2
RHH5209_R3580
12.0
Terminal effector memory CD4 T-cell nTPM: 8.7
Samples: 2
Max nTPM: 11.6
Min nTPM: 5.8
RHH5243_R3615
5.8
RHH5272_R3644
11.6
Terminal effector memory CD8 T-cell nTPM: 17.3
Samples: 4
Max nTPM: 28.5
Min nTPM: 6.6
RHH5232_R3604
28.5
RHH5204_R3575
21.0
RHH5261_R3633
6.6
RHH5296_R3662
13.1
Vd2 gdTCR nTPM: 13.8
Samples: 4
Max nTPM: 15.0
Min nTPM: 11.8
RHH5234_R3606
11.8
RHH5206_R3577
14.0
RHH5263_R3635
15.0
RHH5298_R3664
14.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
