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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.8
nTPM
Monaco:
115.5
nTPM
Schmiedel:
136.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.8
HPA sample
nTPM
gdT-cell nTPM: 56.6
Samples: 6
Max nTPM: 71.6
Min nTPM: 38.3
P10809_1007
38.3
P10809_1022
71.6
P10809_1041
61.2
P10809_1060
54.7
P10809_1077
52.5
P10809_1098
61.0
MAIT T-cell nTPM: 46.4
Samples: 6
Max nTPM: 61.7
Min nTPM: 32.6
P10809_1006
32.6
P10809_1024
51.9
P10809_1043
44.7
P10809_1062
48.2
P10809_1083
39.3
P10809_1097
61.7
Memory CD4 T-cell nTPM: 44.8
Samples: 6
Max nTPM: 50.3
Min nTPM: 33.8
P10809_1014
33.8
P10809_1026
47.7
P10809_1045
49.9
P10809_1064
39.7
P10809_1086
50.3
P10809_1113
47.2
Memory CD8 T-cell nTPM: 53.4
Samples: 5
Max nTPM: 65.3
Min nTPM: 36.0
P10809_1012
36.0
P10809_1027
59.8
P10809_1046
55.3
P10809_1065
65.3
P10809_1111
50.4
Naive CD4 T-cell nTPM: 46.5
Samples: 6
Max nTPM: 57.3
Min nTPM: 32.3
P10809_1015
32.3
P10809_1030
57.3
P10809_1049
52.2
P10809_1068
45.9
P10809_1085
50.6
P10809_1112
40.4
Naive CD8 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 56.6
Min nTPM: 30.5
P10809_1016
30.5
P10809_1031
43.6
P10809_1050
53.2
P10809_1069
56.6
P10809_1087
51.9
P10809_1110
47.6
T-reg nTPM: 58.9
Samples: 6
Max nTPM: 72.6
Min nTPM: 32.4
P10809_1018
32.4
P10809_1037
71.0
P10809_1056
59.7
P10809_1075
59.2
P10809_1094
72.6
P10809_1106
58.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 84.7
Min nTPM: 35.6
RHH5202_R3573
63.5
RHH5230_R3602
84.7
RHH5259_R3631
45.6
RHH5288_R3660
35.6
Effector memory CD8 T-cell nTPM: 99.0
Samples: 4
Max nTPM: 140.5
Min nTPM: 66.7
RHH5203_R3574
140.5
RHH5231_R3603
66.7
RHH5260_R3632
98.9
RHH5289_R3661
89.8
MAIT T-cell nTPM: 105.0
Samples: 4
Max nTPM: 134.9
Min nTPM: 81.5
RHH5233_R3605
107.1
RHH5205_R3576
134.9
RHH5262_R3634
96.3
RHH5297_R3663
81.5
Memory CD4 T-cell TFH nTPM: 73.2
Samples: 4
Max nTPM: 84.5
Min nTPM: 57.7
RHH5300_R3666
83.1
RHH5236_R3608
84.5
RHH5265_R3637
57.7
RHH5208_R3579
67.3
Memory CD4 T-cell Th1 nTPM: 69.6
Samples: 4
Max nTPM: 76.2
Min nTPM: 57.7
RHH5210_R3581
73.6
RHH5302_R3668
57.7
RHH5238_R3610
70.8
RHH5267_R3639
76.2
Memory CD4 T-cell Th1/Th17 nTPM: 77.1
Samples: 4
Max nTPM: 106.2
Min nTPM: 61.0
RHH5303_R3669
106.2
RHH5211_R3582
61.0
RHH5239_R3611
64.8
RHH5268_R3640
76.2
Memory CD4 T-cell Th17 nTPM: 76.1
Samples: 4
Max nTPM: 85.8
Min nTPM: 65.8
RHH5304_R3670
72.1
RHH5212_R3583
65.8
RHH5240_R3612
85.8
RHH5269_R3641
80.7
Memory CD4 T-cell Th2 nTPM: 82.1
Samples: 4
Max nTPM: 107.5
Min nTPM: 64.6
RHH5305_R3671
82.4
RHH5213_R3584
107.5
RHH5241_R3613
73.9
RHH5270_R3642
64.6
Naive CD4 T-cell nTPM: 67.2
Samples: 4
Max nTPM: 87.0
Min nTPM: 54.5
RHH5306_R3672
71.1
RHH5214_R3585
87.0
RHH5242_R3614
54.5
RHH5271_R3643
56.0
Naive CD8 T-cell nTPM: 64.7
Samples: 4
Max nTPM: 70.7
Min nTPM: 61.0
RHH5201_R3572
70.7
RHH5229_R3601
62.4
RHH5258_R3630
64.7
RHH5287_R3659
61.0
Non-Vd2 gdTCR nTPM: 115.5
Samples: 4
Max nTPM: 155.0
Min nTPM: 98.8
RHH5235_R3607
103.7
RHH5264_R3636
98.8
RHH5207_R3578
155.0
RHH5299_R3665
104.4
T-reg nTPM: 82.1
Samples: 4
Max nTPM: 94.9
Min nTPM: 72.4
RHH5301_R3667
82.0
RHH5237_R3609
72.4
RHH5266_R3638
94.9
RHH5209_R3580
78.9
Terminal effector memory CD4 T-cell nTPM: 108.8
Samples: 2
Max nTPM: 110.0
Min nTPM: 107.6
RHH5243_R3615
107.6
RHH5272_R3644
110.0
Terminal effector memory CD8 T-cell nTPM: 102.2
Samples: 4
Max nTPM: 119.3
Min nTPM: 88.0
RHH5232_R3604
119.3
RHH5204_R3575
99.5
RHH5261_R3633
88.0
RHH5296_R3662
102.0
Vd2 gdTCR nTPM: 106.9
Samples: 4
Max nTPM: 139.9
Min nTPM: 79.3
RHH5234_R3606
84.5
RHH5206_R3577
139.9
RHH5263_R3635
123.9
RHH5298_R3664
79.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
