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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
386.5
nTPM
Monaco:
565.3
nTPM
Schmiedel:
1110.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
386.5
HPA sample
nTPM
gdT-cell nTPM: 196.2
Samples: 6
Max nTPM: 232.1
Min nTPM: 161.4
P10809_1007
161.4
P10809_1022
232.1
P10809_1041
201.5
P10809_1060
206.3
P10809_1077
169.6
P10809_1098
206.5
MAIT T-cell nTPM: 233.5
Samples: 6
Max nTPM: 304.8
Min nTPM: 182.4
P10809_1006
215.0
P10809_1024
304.8
P10809_1043
221.5
P10809_1062
250.5
P10809_1083
182.4
P10809_1097
226.9
Memory CD4 T-cell nTPM: 206.1
Samples: 6
Max nTPM: 223.4
Min nTPM: 173.8
P10809_1014
173.8
P10809_1026
208.3
P10809_1045
213.9
P10809_1064
200.4
P10809_1086
223.4
P10809_1113
216.5
Memory CD8 T-cell nTPM: 245.0
Samples: 5
Max nTPM: 273.5
Min nTPM: 210.6
P10809_1012
253.8
P10809_1027
273.5
P10809_1046
255.1
P10809_1065
210.6
P10809_1111
231.9
Naive CD4 T-cell nTPM: 108.8
Samples: 6
Max nTPM: 158.1
Min nTPM: 87.5
P10809_1015
87.5
P10809_1030
111.5
P10809_1049
88.1
P10809_1068
106.7
P10809_1085
158.1
P10809_1112
100.7
Naive CD8 T-cell nTPM: 146.6
Samples: 6
Max nTPM: 203.4
Min nTPM: 98.4
P10809_1016
98.4
P10809_1031
135.8
P10809_1050
137.1
P10809_1069
175.7
P10809_1087
203.4
P10809_1110
129.2
T-reg nTPM: 386.5
Samples: 6
Max nTPM: 460.2
Min nTPM: 320.5
P10809_1018
364.6
P10809_1037
443.2
P10809_1056
396.6
P10809_1075
320.5
P10809_1094
460.2
P10809_1106
334.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
565.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 432.7
Samples: 4
Max nTPM: 511.1
Min nTPM: 361.2
RHH5202_R3573
511.1
RHH5230_R3602
470.5
RHH5259_R3631
387.8
RHH5288_R3660
361.2
Effector memory CD8 T-cell nTPM: 565.3
Samples: 4
Max nTPM: 612.4
Min nTPM: 520.6
RHH5203_R3574
520.6
RHH5231_R3603
551.8
RHH5260_R3632
612.4
RHH5289_R3661
576.5
MAIT T-cell nTPM: 393.1
Samples: 4
Max nTPM: 475.9
Min nTPM: 329.9
RHH5233_R3605
385.9
RHH5205_R3576
475.9
RHH5262_R3634
380.7
RHH5297_R3663
329.9
Memory CD4 T-cell TFH nTPM: 380.3
Samples: 4
Max nTPM: 435.0
Min nTPM: 327.5
RHH5300_R3666
327.5
RHH5236_R3608
393.0
RHH5265_R3637
365.6
RHH5208_R3579
435.0
Memory CD4 T-cell Th1 nTPM: 299.8
Samples: 4
Max nTPM: 360.4
Min nTPM: 240.0
RHH5210_R3581
240.0
RHH5302_R3668
293.1
RHH5238_R3610
360.4
RHH5267_R3639
305.5
Memory CD4 T-cell Th1/Th17 nTPM: 417.6
Samples: 4
Max nTPM: 470.5
Min nTPM: 287.1
RHH5303_R3669
451.9
RHH5211_R3582
470.5
RHH5239_R3611
460.8
RHH5268_R3640
287.1
Memory CD4 T-cell Th17 nTPM: 452.9
Samples: 4
Max nTPM: 603.6
Min nTPM: 336.1
RHH5304_R3670
419.5
RHH5212_R3583
452.2
RHH5240_R3612
603.6
RHH5269_R3641
336.1
Memory CD4 T-cell Th2 nTPM: 358.9
Samples: 4
Max nTPM: 429.3
Min nTPM: 310.3
RHH5305_R3671
359.1
RHH5213_R3584
429.3
RHH5241_R3613
310.3
RHH5270_R3642
336.8
Naive CD4 T-cell nTPM: 164.2
Samples: 4
Max nTPM: 176.2
Min nTPM: 139.7
RHH5306_R3672
139.7
RHH5214_R3585
168.4
RHH5242_R3614
172.6
RHH5271_R3643
176.2
Naive CD8 T-cell nTPM: 175.8
Samples: 4
Max nTPM: 239.3
Min nTPM: 146.5
RHH5201_R3572
170.7
RHH5229_R3601
239.3
RHH5258_R3630
146.5
RHH5287_R3659
146.7
Non-Vd2 gdTCR nTPM: 392.4
Samples: 4
Max nTPM: 463.6
Min nTPM: 324.8
RHH5235_R3607
375.9
RHH5264_R3636
463.6
RHH5207_R3578
405.2
RHH5299_R3665
324.8
T-reg nTPM: 384.3
Samples: 4
Max nTPM: 431.6
Min nTPM: 344.3
RHH5301_R3667
344.3
RHH5237_R3609
431.6
RHH5266_R3638
363.5
RHH5209_R3580
397.9
Terminal effector memory CD4 T-cell nTPM: 403.2
Samples: 2
Max nTPM: 407.9
Min nTPM: 398.4
RHH5243_R3615
407.9
RHH5272_R3644
398.4
Terminal effector memory CD8 T-cell nTPM: 474.9
Samples: 4
Max nTPM: 562.0
Min nTPM: 388.1
RHH5232_R3604
471.9
RHH5204_R3575
388.1
RHH5261_R3633
562.0
RHH5296_R3662
477.7
Vd2 gdTCR nTPM: 374.6
Samples: 4
Max nTPM: 491.5
Min nTPM: 269.8
RHH5234_R3606
292.9
RHH5206_R3577
444.3
RHH5263_R3635
491.5
RHH5298_R3664
269.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.