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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
380.4
nTPM
FANTOM5:
361.7
Scaled Tags Per Million
Pig:
555.1
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
380.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 302.2
2090
Male, age 80, both hemispheres
346.7
2188
Female, age 91, both hemispheres
343.2
2301
Female, age 85, both hemispheres
266.1
1984
Male, age 76, both hemispheres
252.8
Dorsal cochlear nucleus nTPM: 319.2
2802
Male, age 74, right hemisphere
367.8
2187
Female, age 91, both hemispheres
338.5
2378
Male, age 80, both hemispheres
321.4
2370
Male, age 61, both hemispheres
317.2
2058
Male, age 76, both hemispheres
251.1
Dorsal tegmental nucleus nTPM: 363.5
2358
Male, age 61, both hemispheres
542.2
2083
Male, age 80, both hemispheres
361.3
2326
Male, age 74, both hemispheres
292.3
1936
Male, age 76, left hemisphere
258.3
Dorsolateral tegmental area nTPM: 344.2
2337
Male, age 61, both hemispheres
531.9
2751
Female, age 85, both hemispheres
333.4
2654
Male, age 80, both hemispheres
331.6
2141
Male, age 76, both hemispheres
273.5
2360
Male, age 74, both hemispheres
250.6
Kolliker-Fuse nucleus nTPM: 350.9
2315
Male, age 76, right hemisphere
357.3
2793
Female, age 91, left hemisphere
349.9
2163
Male, age 80, both hemispheres
345.4
Lateral lemniscal nuclei nTPM: 271.8
2169
Male, age 76, both hemispheres
334.5
2453
Male, age 74, right hemisphere
306.2
2746
Female, age 85, left hemisphere
295.5
2320
Female, age 91, left hemisphere
228.9
2036
Male, age 80, both hemispheres
193.8
Lateral parabrachial nucleus nTPM: 343.7
2139
Female, age 85, right hemisphere
389.4
2792
Male, age 76, both hemispheres
359.9
2790
Male, age 61, both hemispheres
319.1
2013
Male, age 80, both hemispheres
306.4
Lateral vestibular nucleus nTPM: 323.4
2311
Male, age 80, both hemispheres
327.8
2184
Male, age 76, both hemispheres
319.0
Locus coeruleus nTPM: 314.6
2123
Female, age 91, both hemispheres
371.5
2014
Male, age 55, unknown
341.7
2788
Male, age 74, unknown
337.9
2720
Male, age 74, both hemispheres
309.6
2162
Male, age 80, both hemispheres
284.7
2317
Female, age 72, unknown
284.0
1980
Male, age 76, both hemispheres
273.1
Medial parabrachial nucleus nTPM: 321.9
2170
Female, age 91, both hemispheres
372.0
2854
Male, age 80, both hemispheres
359.0
2156
Male, age 61, both hemispheres
304.5
2463
Female, age 85, right hemisphere
287.7
2786
Male, age 76, both hemispheres
286.1
Medial periolivary nuclei nTPM: 306.2
2171
Female, age 85, both hemispheres
347.1
2063
Male, age 76, both hemispheres
337.1
2791
Male, age 74, right hemisphere
297.0
2458
Female, age 91, both hemispheres
281.2
2081
Male, age 80, both hemispheres
268.7
Motor facial nucleus nTPM: 310.5
2697
Female, age 85, both hemispheres
370.2
2365
Male, age 74, right hemisphere
336.8
2062
Male, age 76, both hemispheres
316.6
2795
Female, age 91, both hemispheres
300.2
2126
Male, age 61, both hemispheres
289.2
2327
Male, age 80, both hemispheres
250.0
Motor trigeminal nucleus nTPM: 295.0
2335
Male, age 61, both hemispheres
345.0
2079
Male, age 80, both hemispheres
297.7
2560
Male, age 74, both hemispheres
293.1
2321
Female, age 91, both hemispheres
270.6
2309
Male, age 76, both hemispheres
268.6
Nuclei of the trapezoid body nTPM: 286.7
1983
Male, age 76, both hemispheres
354.1
2735
Female, age 85, both hemispheres
305.9
2159
Male, age 61, both hemispheres
280.8
2166
Male, age 80, both hemispheres
270.0
2368
Female, age 91, both hemispheres
222.6
Nucleus raphe magnus nTPM: 307.4
2172
Female, age 85, both hemispheres
379.5
2160
Male, age 61, both hemispheres
320.4
2051
Male, age 76, both hemispheres
320.1
2455
Male, age 74, both hemispheres
313.7
2328
Male, age 80, both hemispheres
275.8
2459
Female, age 91, both hemispheres
235.1
Paramedian reticular nucleus nTPM: 315.4
2050
Female, age 85, both hemispheres
378.4
2052
Male, age 76, both hemispheres
315.1
2057
Male, age 80, both hemispheres
297.2
2313
Male, age 61, both hemispheres
271.1
Pedunculopontine tegmental nucleus nTPM: 380.4
2338
Male, age 61, both hemispheres
514.3
2334
Male, age 80, both hemispheres
332.9
1921
Female, age 85, both hemispheres
294.1
Pontine nuclei nTPM: 314.1
2787
Female, age 85, both hemispheres
457.0
1863
Male, age 55, unknown
385.4
2109
Female, age 72, unknown
304.8
2115
Male, age 80, left hemisphere
280.1
1968
Male, age 76, left hemisphere
278.7
2319
Female, age 91, both hemispheres
277.3
2454
Male, age 74, left hemisphere
276.8
2727
Male, age 61, right hemisphere
252.9
Pontine raphe nucleus nTPM: 313.9
2122
Female, age 85, midline
328.9
2853
Male, age 76, midline
298.8
Posteroventral cochlear nucleus nTPM: 330.4
2341
Male, age 80, both hemispheres
395.6
2135
Female, age 91, both hemispheres
338.3
2371
Male, age 61, both hemispheres
313.9
2070
Male, age 76, both hemispheres
305.1
2752
Female, age 85, both hemispheres
299.0
Principal sensory trigeminal nucleus nTPM: 279.2
2367
Female, age 91, left hemisphere
291.9
2324
Male, age 76, both hemispheres
291.1
2158
Male, age 61, both hemispheres
287.1
2008
Male, age 80, left hemisphere
246.6
Reticular pontine nucleus, caudal nTPM: 298.4
2092
Male, age 76, both hemispheres
357.8
2559
Male, age 74, both hemispheres
311.1
2457
Female, age 91, both hemispheres
284.1
2332
Male, age 80, right hemisphere
240.5
Reticular pontine nucleus, oral nTPM: 322.8
1939
Male, age 80, both hemispheres
360.0
2167
Male, age 76, both hemispheres
319.3
2012
Female, age 85, both hemispheres
315.2
2366
Female, age 91, both hemispheres
314.8
2361
Male, age 74, both hemispheres
304.7
Reticulotegmental nucleus nTPM: 310.6
2452
Male, age 74, both hemispheres
320.9
2322
Female, age 91, both hemispheres
310.0
2333
Male, age 80, both hemispheres
308.6
2325
Male, age 76, both hemispheres
302.8
Spinal trigeminal nucleus, oral nTPM: 295.2
2164
Male, age 80, both hemispheres
366.8
2737
Female, age 85, both hemispheres
289.1
1978
Male, age 76, both hemispheres
229.7
Subcoeruleus area nTPM: 299.4
1958
Male, age 80, both hemispheres
323.7
2323
Female, age 91, left hemisphere
310.6
2451
Male, age 74, both hemispheres
299.5
2369
Female, age 85, left hemisphere
297.6
2089
Male, age 76, left hemisphere
265.8
Superior olive nTPM: 298.5
1875
Female, age 85, both hemispheres
343.1
2020
Male, age 76, both hemispheres
312.3
2364
Male, age 74, right hemisphere
306.0
2561
Female, age 91, both hemispheres
270.8
2329
Male, age 80, right hemisphere
260.3
Ventral periolivary nuclei nTPM: 315.1
2165
Male, age 80, both hemispheres
333.1
2130
Female, age 85, both hemispheres
323.3
2023
Male, age 76, both hemispheres
318.6
2794
Female, age 91, left hemisphere
285.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 329.1
2359
Male, age 61, both hemispheres
433.5
2840
Female, age 85, both hemispheres
366.4
1959
Male, age 76, both hemispheres
321.4
2161
Male, age 80, both hemispheres
314.1
2449
Male, age 74, both hemispheres
297.2
2456
Female, age 91, both hemispheres
241.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
