HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.0 nTPM
HPA Brain:65.5 nTPM
GTEx:20.0 nTPM
FANTOM5:27.1 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:8.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017910Antibody HPA019492Antibody CAB008096
Glial cells MediumMediumMedium
Neuronal cells Not detectedHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.5
Sample id Sample description nTPM
Hippocampus
nTPM: 46.3
1911 Female, age 85, right hemisphere 50.2
2529 Female, age 94, left hemisphere 49.8
1898 Male, age 80, left hemisphere 46.4
2621 Female, age 67, right hemisphere 45.6
2148 Female, age 91, left hemisphere 44.6
1855 Male, age 76, left hemisphere 41.4
Dentate gyrus
nTPM: 51.1
2530 Female, age 94, left hemisphere 70.2
2010 Male, age 76, both hemispheres 62.5
2528 Male, age 74, both hemispheres 53.1
2246 Female, age 85, both hemispheres 47.9
2531 Female, age 67, both hemispheres 37.9
1927 Female, age 91, both hemispheres 34.9
Entorhinal gyrus
nTPM: 52.5
2117 Female, age 91, right hemisphere 66.4
2764 Male, age 80, right hemisphere 61.1
2686 Male, age 75, right hemisphere 50.5
1938 Female, age 85, left hemisphere 47.2
1787 Male, age 76, left hemisphere 45.5
2613 Female, age 94, left hemisphere 44.3
Hippocampus, CA1
nTPM: 42.5
2082 Female, age 91, right hemisphere 54.5
1873 Female, age 85, both hemispheres 47.6
2527 Male, age 74, both hemispheres 45.0
2045 Male, age 76, both hemispheres 34.2
2749 Male, age 80, left hemisphere 31.4
Hippocampus, CA2
nTPM: 51.6
1963 Male, age 80, left hemisphere 57.4
2249 Male, age 74, both hemispheres 57.0
1940 Female, age 85, left hemisphere 55.7
2437 Female, age 94, left hemisphere 53.6
2113 Female, age 91, right hemisphere 51.2
1892 Male, age 76, both hemispheres 34.8
Hippocampus, CA3
nTPM: 38.0
1891 Female, age 85, both hemispheres 59.5
1867 Male, age 76, both hemispheres 41.4
2436 Male, age 74, both hemispheres 40.6
2620 Female, age 94, left hemisphere 32.0
2137 Male, age 80, left hemisphere 29.7
2861 Female, age 67, both hemispheres 24.8
Parahippocampal cortex
nTPM: 45.1
2692 Male, age 74, both hemispheres 63.4
2532 Female, age 72, left hemisphere 60.1
2018 Male, age 76, both hemispheres 55.9
1990 Female, age 91, right hemisphere 50.5
1850 Male, age 80, both hemispheres 44.8
1933 Female, age 85, both hemispheres 41.1
2693 Female, age 94, both hemispheres 40.3
2245 Female, age 91, both hemispheres 38.8
2250 Female, age 67, right hemisphere 28.4
2622 Female, age 67, right hemisphere 27.4
Perirhinal gyrus
nTPM: 35.8
2521 Female, age 94, right hemisphere 40.9
2848 Male, age 76, right hemisphere 39.5
1794 Male, age 80, right hemisphere 34.6
1847 Female, age 91, left hemisphere 32.7
1841 Female, age 85, right hemisphere 31.2
Subiculum
nTPM: 65.5
2042 Male, age 76, both hemispheres 95.4
1901 Male, age 80, both hemispheres 73.5
1977 Female, age 85, both hemispheres 63.4
2438 Female, age 94, left hemisphere 60.6
2619 Male, age 74, both hemispheres 51.7
2729 Female, age 91, right hemisphere 48.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 59.3
Min nTPM: 6.9
Std nTPM: 9.7
Median nTPM: 17.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 46.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 45.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 42.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 42.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 42.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 41.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 40.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 40.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.1
FF:10153-102I9 76 years, female 35.6
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.8
Sample A Female 12.9
Sample B Female 13.7
Sample C Male 11.3
Sample D Male 10.8
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 26.8
Min nTPM: 11.6
Sample A Female 26.8
Sample B Female 17.3
Sample C Male 25.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.2
Sample A Female 9.4
Sample B Female 10.8
Sample C Male 10.3
Sample D Male 9.2
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 18.6
Min nTPM: 11.2
Sample A Female 18.6
Sample B Female 11.2
Sample C Male 17.3
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 3.4
Sample A Male 6.5
Sample B Male 5.0
Sample C Female 5.2
Sample D Female 3.4
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 8.1
Sample C Female 10.5
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73584861 Antisense, RP_051206_01_C12, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org