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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.4
nTPM
Monaco:
193.6
nTPM
Schmiedel:
124.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.4
HPA sample
nTPM
gdT-cell nTPM: 22.4
Samples: 6
Max nTPM: 32.5
Min nTPM: 10.1
P10809_1007
32.5
P10809_1022
21.6
P10809_1041
10.1
P10809_1060
21.3
P10809_1077
27.1
P10809_1098
21.6
MAIT T-cell nTPM: 21.6
Samples: 6
Max nTPM: 40.3
Min nTPM: 8.1
P10809_1006
40.3
P10809_1024
22.0
P10809_1043
15.9
P10809_1062
22.0
P10809_1083
8.1
P10809_1097
21.1
Memory CD4 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 26.9
Min nTPM: 8.5
P10809_1014
26.9
P10809_1026
16.2
P10809_1045
10.7
P10809_1064
8.5
P10809_1086
13.5
P10809_1113
11.9
Memory CD8 T-cell nTPM: 17.2
Samples: 5
Max nTPM: 35.2
Min nTPM: 7.1
P10809_1012
35.2
P10809_1027
15.1
P10809_1046
19.2
P10809_1065
9.5
P10809_1111
7.1
Naive CD4 T-cell nTPM: 12.6
Samples: 6
Max nTPM: 18.3
Min nTPM: 7.6
P10809_1015
16.3
P10809_1030
18.3
P10809_1049
10.8
P10809_1068
7.6
P10809_1085
9.6
P10809_1112
12.8
Naive CD8 T-cell nTPM: 16.1
Samples: 6
Max nTPM: 25.1
Min nTPM: 6.4
P10809_1016
25.1
P10809_1031
24.4
P10809_1050
14.7
P10809_1069
9.6
P10809_1087
16.3
P10809_1110
6.4
T-reg nTPM: 14.5
Samples: 6
Max nTPM: 31.7
Min nTPM: 8.0
P10809_1018
31.7
P10809_1037
9.0
P10809_1056
8.4
P10809_1075
8.0
P10809_1094
15.5
P10809_1106
14.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 161.5
Samples: 4
Max nTPM: 182.6
Min nTPM: 138.7
RHH5202_R3573
145.1
RHH5230_R3602
179.7
RHH5259_R3631
182.6
RHH5288_R3660
138.7
Effector memory CD8 T-cell nTPM: 181.5
Samples: 4
Max nTPM: 187.9
Min nTPM: 173.6
RHH5203_R3574
183.7
RHH5231_R3603
187.9
RHH5260_R3632
180.9
RHH5289_R3661
173.6
MAIT T-cell nTPM: 193.6
Samples: 4
Max nTPM: 245.6
Min nTPM: 159.0
RHH5233_R3605
205.4
RHH5205_R3576
245.6
RHH5262_R3634
164.5
RHH5297_R3663
159.0
Memory CD4 T-cell TFH nTPM: 124.5
Samples: 4
Max nTPM: 165.8
Min nTPM: 105.1
RHH5300_R3666
113.8
RHH5236_R3608
113.3
RHH5265_R3637
105.1
RHH5208_R3579
165.8
Memory CD4 T-cell Th1 nTPM: 144.6
Samples: 4
Max nTPM: 172.1
Min nTPM: 117.6
RHH5210_R3581
134.1
RHH5302_R3668
117.6
RHH5238_R3610
172.1
RHH5267_R3639
154.4
Memory CD4 T-cell Th1/Th17 nTPM: 147.4
Samples: 4
Max nTPM: 192.9
Min nTPM: 126.8
RHH5303_R3669
129.0
RHH5211_R3582
140.7
RHH5239_R3611
192.9
RHH5268_R3640
126.8
Memory CD4 T-cell Th17 nTPM: 172.0
Samples: 4
Max nTPM: 191.5
Min nTPM: 154.8
RHH5304_R3670
162.1
RHH5212_R3583
154.8
RHH5240_R3612
191.5
RHH5269_R3641
179.7
Memory CD4 T-cell Th2 nTPM: 141.1
Samples: 4
Max nTPM: 148.1
Min nTPM: 137.1
RHH5305_R3671
137.1
RHH5213_R3584
148.1
RHH5241_R3613
139.2
RHH5270_R3642
140.0
Naive CD4 T-cell nTPM: 101.2
Samples: 4
Max nTPM: 127.4
Min nTPM: 87.0
RHH5306_R3672
87.0
RHH5214_R3585
93.8
RHH5242_R3614
127.4
RHH5271_R3643
96.5
Naive CD8 T-cell nTPM: 132.5
Samples: 4
Max nTPM: 151.6
Min nTPM: 104.9
RHH5201_R3572
104.9
RHH5229_R3601
151.6
RHH5258_R3630
127.5
RHH5287_R3659
145.9
Non-Vd2 gdTCR nTPM: 175.7
Samples: 4
Max nTPM: 193.4
Min nTPM: 151.0
RHH5235_R3607
193.4
RHH5264_R3636
151.0
RHH5207_R3578
186.0
RHH5299_R3665
172.2
T-reg nTPM: 131.2
Samples: 4
Max nTPM: 147.5
Min nTPM: 106.7
RHH5301_R3667
137.2
RHH5237_R3609
147.5
RHH5266_R3638
133.2
RHH5209_R3580
106.7
Terminal effector memory CD4 T-cell nTPM: 190.2
Samples: 2
Max nTPM: 234.2
Min nTPM: 146.2
RHH5243_R3615
234.2
RHH5272_R3644
146.2
Terminal effector memory CD8 T-cell nTPM: 187.1
Samples: 4
Max nTPM: 206.2
Min nTPM: 173.8
RHH5232_R3604
206.2
RHH5204_R3575
173.8
RHH5261_R3633
187.4
RHH5296_R3662
181.1
Vd2 gdTCR nTPM: 169.6
Samples: 4
Max nTPM: 193.0
Min nTPM: 152.8
RHH5234_R3606
193.0
RHH5206_R3577
160.0
RHH5263_R3635
172.6
RHH5298_R3664
152.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
