HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:33.7 nTPM
HPA Brain:36.3 nTPM
GTEx:33.7 nTPM
FANTOM5:53.6 Scaled Tags Per Million
Pig:16.0 nTPM
Mouse:16.4 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.2
1898 Male, age 80, left hemisphere 36.5
2529 Female, age 94, left hemisphere 36.5
1911 Female, age 85, right hemisphere 36.2
1855 Male, age 76, left hemisphere 34.9
2148 Female, age 91, left hemisphere 33.1
2621 Female, age 67, right hemisphere 28.0
Dentate gyrus
nTPM: 34.9
2528 Male, age 74, both hemispheres 39.8
2010 Male, age 76, both hemispheres 39.5
2530 Female, age 94, left hemisphere 35.3
1927 Female, age 91, both hemispheres 34.3
2246 Female, age 85, both hemispheres 33.5
2531 Female, age 67, both hemispheres 27.2
Entorhinal gyrus
nTPM: 34.8
2117 Female, age 91, right hemisphere 40.2
1938 Female, age 85, left hemisphere 36.1
2764 Male, age 80, right hemisphere 35.7
2686 Male, age 75, right hemisphere 34.4
1787 Male, age 76, left hemisphere 34.3
2613 Female, age 94, left hemisphere 28.3
Hippocampus, CA1
nTPM: 34.2
2082 Female, age 91, right hemisphere 36.6
1873 Female, age 85, both hemispheres 34.1
2527 Male, age 74, both hemispheres 33.8
2045 Male, age 76, both hemispheres 33.7
2749 Male, age 80, left hemisphere 32.9
Hippocampus, CA2
nTPM: 34.3
2113 Female, age 91, right hemisphere 37.4
2249 Male, age 74, both hemispheres 37.4
1963 Male, age 80, left hemisphere 34.8
2437 Female, age 94, left hemisphere 33.8
1940 Female, age 85, left hemisphere 33.7
1892 Male, age 76, both hemispheres 28.8
Hippocampus, CA3
nTPM: 34.2
1891 Female, age 85, both hemispheres 40.0
2436 Male, age 74, both hemispheres 34.8
2620 Female, age 94, left hemisphere 34.2
2861 Female, age 67, both hemispheres 33.0
1867 Male, age 76, both hemispheres 32.3
2137 Male, age 80, left hemisphere 31.1
Parahippocampal cortex
nTPM: 35.6
1850 Male, age 80, both hemispheres 39.3
1933 Female, age 85, both hemispheres 39.2
2532 Female, age 72, left hemisphere 36.8
2693 Female, age 94, both hemispheres 36.5
2018 Male, age 76, both hemispheres 35.9
2692 Male, age 74, both hemispheres 35.5
1990 Female, age 91, right hemisphere 34.9
2245 Female, age 91, both hemispheres 34.0
2622 Female, age 67, right hemisphere 32.9
2250 Female, age 67, right hemisphere 30.9
Perirhinal gyrus
nTPM: 34.6
1794 Male, age 80, right hemisphere 37.4
2848 Male, age 76, right hemisphere 34.2
1841 Female, age 85, right hemisphere 33.9
1847 Female, age 91, left hemisphere 33.8
2521 Female, age 94, right hemisphere 33.6
Subiculum
nTPM: 36.3
2042 Male, age 76, both hemispheres 41.4
1977 Female, age 85, both hemispheres 38.1
2729 Female, age 91, right hemisphere 37.7
2619 Male, age 74, both hemispheres 36.0
1901 Male, age 80, both hemispheres 34.5
2438 Female, age 94, left hemisphere 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.7
Samples: 197

Max nTPM: 61.4
Min nTPM: 22.1
Std nTPM: 7.0
Median nTPM: 32.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 61.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 53.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 52.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 52.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 51.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 49.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 48.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 48.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 47.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 47.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 47.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.6
FF:10169-103B7 60 years, female 57.1
FF:10153-102I9 76 years, female 50.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.0
Pig sample Sample description nTPM
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.4
Sample A Female 17.0
Sample B Female 14.4
Sample C Male 16.8
Sample D Male 14.6
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 11.0
Sample A Female 14.0
Sample B Female 13.4
Sample C Male 16.5
Sample D Male 11.0
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.1
Sample A Female 14.1
Sample B Female 18.0
Sample C Male 17.3
Sample D Male 14.4
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 13.8
Sample C Male 15.8
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.4
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.0
Sample A Male 15.0
Sample B Male 16.4
Sample C Female 14.0
Sample D Female 20.0
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.6
Sample A Male 14.4
Sample B Male 16.6
Sample C Female 17.7
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68924829 Antisense, RP_050309_01_B02, Mouse strain C57BL/6J (56 days, male) 2.2

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