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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.9
nTPM
Monaco:
112.2
nTPM
Schmiedel:
114.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.9
HPA sample
nTPM
gdT-cell nTPM: 51.2
Samples: 6
Max nTPM: 85.9
Min nTPM: 35.2
P10809_1007
39.4
P10809_1022
51.4
P10809_1041
85.9
P10809_1060
50.0
P10809_1077
35.2
P10809_1098
45.1
MAIT T-cell nTPM: 53.1
Samples: 6
Max nTPM: 69.2
Min nTPM: 34.4
P10809_1006
58.4
P10809_1024
43.8
P10809_1043
69.2
P10809_1062
50.3
P10809_1083
34.4
P10809_1097
62.7
Memory CD4 T-cell nTPM: 59.2
Samples: 6
Max nTPM: 68.7
Min nTPM: 43.0
P10809_1014
58.4
P10809_1026
68.7
P10809_1045
64.5
P10809_1064
57.1
P10809_1086
43.0
P10809_1113
63.7
Memory CD8 T-cell nTPM: 52.8
Samples: 5
Max nTPM: 58.9
Min nTPM: 46.9
P10809_1012
58.9
P10809_1027
49.1
P10809_1046
56.5
P10809_1065
52.6
P10809_1111
46.9
Naive CD4 T-cell nTPM: 77.9
Samples: 6
Max nTPM: 103.4
Min nTPM: 53.4
P10809_1015
69.2
P10809_1030
77.0
P10809_1049
103.4
P10809_1068
81.0
P10809_1085
53.4
P10809_1112
83.6
Naive CD8 T-cell nTPM: 57.0
Samples: 6
Max nTPM: 72.9
Min nTPM: 39.6
P10809_1016
72.9
P10809_1031
46.3
P10809_1050
52.1
P10809_1069
61.9
P10809_1087
39.6
P10809_1110
69.3
T-reg nTPM: 77.9
Samples: 6
Max nTPM: 114.5
Min nTPM: 63.1
P10809_1018
63.1
P10809_1037
64.1
P10809_1056
69.5
P10809_1075
114.5
P10809_1094
78.2
P10809_1106
77.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.7
Samples: 4
Max nTPM: 154.5
Min nTPM: 72.8
RHH5202_R3573
154.5
RHH5230_R3602
89.2
RHH5259_R3631
72.8
RHH5288_R3660
122.1
Effector memory CD8 T-cell nTPM: 86.6
Samples: 4
Max nTPM: 122.4
Min nTPM: 45.6
RHH5203_R3574
122.4
RHH5231_R3603
92.4
RHH5260_R3632
45.6
RHH5289_R3661
86.0
MAIT T-cell nTPM: 107.3
Samples: 4
Max nTPM: 143.1
Min nTPM: 60.4
RHH5233_R3605
98.1
RHH5205_R3576
60.4
RHH5262_R3634
143.1
RHH5297_R3663
127.5
Memory CD4 T-cell TFH nTPM: 106.7
Samples: 4
Max nTPM: 114.8
Min nTPM: 95.6
RHH5300_R3666
113.8
RHH5236_R3608
102.7
RHH5265_R3637
114.8
RHH5208_R3579
95.6
Memory CD4 T-cell Th1 nTPM: 86.0
Samples: 4
Max nTPM: 105.0
Min nTPM: 66.5
RHH5210_R3581
105.0
RHH5302_R3668
101.4
RHH5238_R3610
66.5
RHH5267_R3639
71.1
Memory CD4 T-cell Th1/Th17 nTPM: 82.6
Samples: 4
Max nTPM: 102.0
Min nTPM: 64.5
RHH5303_R3669
102.0
RHH5211_R3582
98.4
RHH5239_R3611
65.6
RHH5268_R3640
64.5
Memory CD4 T-cell Th17 nTPM: 80.8
Samples: 4
Max nTPM: 91.2
Min nTPM: 67.9
RHH5304_R3670
81.5
RHH5212_R3583
91.2
RHH5240_R3612
67.9
RHH5269_R3641
82.7
Memory CD4 T-cell Th2 nTPM: 102.8
Samples: 4
Max nTPM: 122.8
Min nTPM: 81.7
RHH5305_R3671
85.8
RHH5213_R3584
120.8
RHH5241_R3613
122.8
RHH5270_R3642
81.7
Naive CD4 T-cell nTPM: 112.2
Samples: 4
Max nTPM: 127.6
Min nTPM: 90.2
RHH5306_R3672
127.6
RHH5214_R3585
118.4
RHH5242_R3614
112.6
RHH5271_R3643
90.2
Naive CD8 T-cell nTPM: 103.4
Samples: 4
Max nTPM: 134.0
Min nTPM: 47.9
RHH5201_R3572
134.0
RHH5229_R3601
47.9
RHH5258_R3630
132.4
RHH5287_R3659
99.1
Non-Vd2 gdTCR nTPM: 85.0
Samples: 4
Max nTPM: 103.2
Min nTPM: 58.2
RHH5235_R3607
58.2
RHH5264_R3636
103.2
RHH5207_R3578
93.3
RHH5299_R3665
85.2
T-reg nTPM: 107.3
Samples: 4
Max nTPM: 136.7
Min nTPM: 72.4
RHH5301_R3667
136.7
RHH5237_R3609
135.3
RHH5266_R3638
72.4
RHH5209_R3580
84.7
Terminal effector memory CD4 T-cell nTPM: 89.4
Samples: 2
Max nTPM: 117.3
Min nTPM: 61.5
RHH5243_R3615
61.5
RHH5272_R3644
117.3
Terminal effector memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 113.4
Min nTPM: 58.8
RHH5232_R3604
97.8
RHH5204_R3575
91.1
RHH5261_R3633
58.8
RHH5296_R3662
113.4
Vd2 gdTCR nTPM: 94.4
Samples: 4
Max nTPM: 117.6
Min nTPM: 67.5
RHH5234_R3606
117.6
RHH5206_R3577
93.3
RHH5263_R3635
67.5
RHH5298_R3664
99.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
