We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.3
nTPM
Monaco:
152.8
nTPM
Schmiedel:
444.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.3
HPA sample
nTPM
gdT-cell nTPM: 48.1
Samples: 6
Max nTPM: 56.8
Min nTPM: 43.6
P10809_1007
43.6
P10809_1022
50.3
P10809_1041
56.8
P10809_1060
45.6
P10809_1077
47.4
P10809_1098
44.7
MAIT T-cell nTPM: 61.2
Samples: 6
Max nTPM: 73.7
Min nTPM: 48.6
P10809_1006
67.5
P10809_1024
73.7
P10809_1043
60.0
P10809_1062
48.6
P10809_1083
53.8
P10809_1097
63.8
Memory CD4 T-cell nTPM: 45.7
Samples: 6
Max nTPM: 56.3
Min nTPM: 36.8
P10809_1014
44.8
P10809_1026
39.7
P10809_1045
56.3
P10809_1064
36.8
P10809_1086
50.8
P10809_1113
45.9
Memory CD8 T-cell nTPM: 46.4
Samples: 5
Max nTPM: 51.5
Min nTPM: 36.5
P10809_1012
51.5
P10809_1027
36.5
P10809_1046
51.4
P10809_1065
51.3
P10809_1111
41.4
Naive CD4 T-cell nTPM: 43.4
Samples: 6
Max nTPM: 57.7
Min nTPM: 32.5
P10809_1015
39.7
P10809_1030
35.7
P10809_1049
32.5
P10809_1068
57.7
P10809_1085
49.7
P10809_1112
44.9
Naive CD8 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 48.3
Min nTPM: 33.1
P10809_1016
33.1
P10809_1031
39.5
P10809_1050
40.1
P10809_1069
46.2
P10809_1087
48.3
P10809_1110
37.1
T-reg nTPM: 49.3
Samples: 6
Max nTPM: 70.2
Min nTPM: 35.4
P10809_1018
47.1
P10809_1037
35.4
P10809_1056
57.3
P10809_1075
38.4
P10809_1094
70.2
P10809_1106
47.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 116.9
Samples: 4
Max nTPM: 125.9
Min nTPM: 106.7
RHH5202_R3573
106.7
RHH5230_R3602
119.6
RHH5259_R3631
125.9
RHH5288_R3660
115.4
Effector memory CD8 T-cell nTPM: 123.3
Samples: 4
Max nTPM: 154.2
Min nTPM: 109.9
RHH5203_R3574
109.9
RHH5231_R3603
117.8
RHH5260_R3632
111.2
RHH5289_R3661
154.2
MAIT T-cell nTPM: 131.9
Samples: 4
Max nTPM: 147.3
Min nTPM: 114.7
RHH5233_R3605
133.9
RHH5205_R3576
147.3
RHH5262_R3634
114.7
RHH5297_R3663
131.8
Memory CD4 T-cell TFH nTPM: 113.6
Samples: 4
Max nTPM: 132.0
Min nTPM: 101.7
RHH5300_R3666
101.7
RHH5236_R3608
104.9
RHH5265_R3637
115.6
RHH5208_R3579
132.0
Memory CD4 T-cell Th1 nTPM: 101.0
Samples: 4
Max nTPM: 116.6
Min nTPM: 85.6
RHH5210_R3581
85.6
RHH5302_R3668
99.7
RHH5238_R3610
101.9
RHH5267_R3639
116.6
Memory CD4 T-cell Th1/Th17 nTPM: 134.2
Samples: 4
Max nTPM: 151.2
Min nTPM: 97.3
RHH5303_R3669
151.2
RHH5211_R3582
142.1
RHH5239_R3611
146.3
RHH5268_R3640
97.3
Memory CD4 T-cell Th17 nTPM: 152.8
Samples: 4
Max nTPM: 178.3
Min nTPM: 135.7
RHH5304_R3670
158.1
RHH5212_R3583
135.7
RHH5240_R3612
178.3
RHH5269_R3641
138.9
Memory CD4 T-cell Th2 nTPM: 136.5
Samples: 4
Max nTPM: 183.6
Min nTPM: 116.9
RHH5305_R3671
124.6
RHH5213_R3584
183.6
RHH5241_R3613
121.0
RHH5270_R3642
116.9
Naive CD4 T-cell nTPM: 110.1
Samples: 4
Max nTPM: 125.5
Min nTPM: 101.8
RHH5306_R3672
101.8
RHH5214_R3585
105.3
RHH5242_R3614
107.9
RHH5271_R3643
125.5
Naive CD8 T-cell nTPM: 106.6
Samples: 4
Max nTPM: 123.4
Min nTPM: 80.1
RHH5201_R3572
112.8
RHH5229_R3601
123.4
RHH5258_R3630
80.1
RHH5287_R3659
109.9
Non-Vd2 gdTCR nTPM: 110.5
Samples: 4
Max nTPM: 142.9
Min nTPM: 91.0
RHH5235_R3607
91.0
RHH5264_R3636
103.3
RHH5207_R3578
142.9
RHH5299_R3665
104.8
T-reg nTPM: 120.2
Samples: 4
Max nTPM: 141.8
Min nTPM: 99.1
RHH5301_R3667
99.1
RHH5237_R3609
133.9
RHH5266_R3638
105.9
RHH5209_R3580
141.8
Terminal effector memory CD4 T-cell nTPM: 101.8
Samples: 2
Max nTPM: 108.0
Min nTPM: 95.5
RHH5243_R3615
95.5
RHH5272_R3644
108.0
Terminal effector memory CD8 T-cell nTPM: 119.7
Samples: 4
Max nTPM: 135.6
Min nTPM: 93.9
RHH5232_R3604
135.6
RHH5204_R3575
93.9
RHH5261_R3633
131.6
RHH5296_R3662
117.6
Vd2 gdTCR nTPM: 104.8
Samples: 4
Max nTPM: 108.3
Min nTPM: 100.7
RHH5234_R3606
102.2
RHH5206_R3577
107.8
RHH5263_R3635
108.3
RHH5298_R3664
100.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
