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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.5
nTPM
Monaco:
61.0
nTPM
Schmiedel:
33.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.5
HPA sample
nTPM
gdT-cell nTPM: 35.0
Samples: 6
Max nTPM: 44.1
Min nTPM: 22.9
P10809_1007
22.9
P10809_1022
36.9
P10809_1041
42.1
P10809_1060
35.9
P10809_1077
28.0
P10809_1098
44.1
MAIT T-cell nTPM: 53.5
Samples: 6
Max nTPM: 60.6
Min nTPM: 32.1
P10809_1006
32.1
P10809_1024
60.6
P10809_1043
60.6
P10809_1062
56.2
P10809_1083
51.5
P10809_1097
60.0
Memory CD4 T-cell nTPM: 45.6
Samples: 6
Max nTPM: 55.9
Min nTPM: 31.8
P10809_1014
31.8
P10809_1026
55.0
P10809_1045
51.0
P10809_1064
39.2
P10809_1086
40.9
P10809_1113
55.9
Memory CD8 T-cell nTPM: 36.9
Samples: 5
Max nTPM: 50.1
Min nTPM: 18.0
P10809_1012
18.0
P10809_1027
41.9
P10809_1046
50.1
P10809_1065
27.5
P10809_1111
46.9
Naive CD4 T-cell nTPM: 49.0
Samples: 6
Max nTPM: 72.2
Min nTPM: 25.7
P10809_1015
25.7
P10809_1030
51.4
P10809_1049
72.2
P10809_1068
39.7
P10809_1085
57.0
P10809_1112
47.9
Naive CD8 T-cell nTPM: 33.9
Samples: 6
Max nTPM: 50.4
Min nTPM: 24.4
P10809_1016
24.4
P10809_1031
50.4
P10809_1050
30.5
P10809_1069
31.0
P10809_1087
28.4
P10809_1110
38.6
T-reg nTPM: 58.5
Samples: 6
Max nTPM: 88.2
Min nTPM: 28.4
P10809_1018
28.4
P10809_1037
47.8
P10809_1056
88.2
P10809_1075
63.4
P10809_1094
58.3
P10809_1106
64.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.8
Samples: 4
Max nTPM: 56.6
Min nTPM: 32.8
RHH5202_R3573
32.8
RHH5230_R3602
40.6
RHH5259_R3631
37.0
RHH5288_R3660
56.6
Effector memory CD8 T-cell nTPM: 46.4
Samples: 4
Max nTPM: 56.1
Min nTPM: 28.8
RHH5203_R3574
55.8
RHH5231_R3603
28.8
RHH5260_R3632
44.8
RHH5289_R3661
56.1
MAIT T-cell nTPM: 44.5
Samples: 4
Max nTPM: 52.6
Min nTPM: 29.9
RHH5233_R3605
29.9
RHH5205_R3576
45.0
RHH5262_R3634
50.4
RHH5297_R3663
52.6
Memory CD4 T-cell TFH nTPM: 49.5
Samples: 4
Max nTPM: 61.4
Min nTPM: 34.1
RHH5300_R3666
52.1
RHH5236_R3608
61.4
RHH5265_R3637
50.3
RHH5208_R3579
34.1
Memory CD4 T-cell Th1 nTPM: 54.2
Samples: 4
Max nTPM: 70.1
Min nTPM: 44.5
RHH5210_R3581
70.1
RHH5302_R3668
46.4
RHH5238_R3610
44.5
RHH5267_R3639
55.7
Memory CD4 T-cell Th1/Th17 nTPM: 52.2
Samples: 4
Max nTPM: 69.4
Min nTPM: 30.0
RHH5303_R3669
61.6
RHH5211_R3582
69.4
RHH5239_R3611
30.0
RHH5268_R3640
47.9
Memory CD4 T-cell Th17 nTPM: 38.0
Samples: 4
Max nTPM: 62.0
Min nTPM: 19.0
RHH5304_R3670
43.9
RHH5212_R3583
62.0
RHH5240_R3612
19.0
RHH5269_R3641
27.2
Memory CD4 T-cell Th2 nTPM: 53.9
Samples: 4
Max nTPM: 65.8
Min nTPM: 46.8
RHH5305_R3671
54.0
RHH5213_R3584
46.8
RHH5241_R3613
49.0
RHH5270_R3642
65.8
Naive CD4 T-cell nTPM: 47.6
Samples: 4
Max nTPM: 55.5
Min nTPM: 36.9
RHH5306_R3672
55.5
RHH5214_R3585
47.8
RHH5242_R3614
36.9
RHH5271_R3643
50.3
Naive CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 50.7
Min nTPM: 29.5
RHH5201_R3572
29.5
RHH5229_R3601
40.1
RHH5258_R3630
50.7
RHH5287_R3659
43.4
Non-Vd2 gdTCR nTPM: 43.3
Samples: 4
Max nTPM: 47.5
Min nTPM: 36.1
RHH5235_R3607
42.4
RHH5264_R3636
47.3
RHH5207_R3578
36.1
RHH5299_R3665
47.5
T-reg nTPM: 61.0
Samples: 4
Max nTPM: 65.9
Min nTPM: 54.1
RHH5301_R3667
54.1
RHH5237_R3609
60.1
RHH5266_R3638
65.9
RHH5209_R3580
63.7
Terminal effector memory CD4 T-cell nTPM: 23.4
Samples: 2
Max nTPM: 31.3
Min nTPM: 15.4
RHH5243_R3615
15.4
RHH5272_R3644
31.3
Terminal effector memory CD8 T-cell nTPM: 36.9
Samples: 4
Max nTPM: 48.3
Min nTPM: 28.2
RHH5232_R3604
34.1
RHH5204_R3575
48.3
RHH5261_R3633
36.8
RHH5296_R3662
28.2
Vd2 gdTCR nTPM: 58.3
Samples: 4
Max nTPM: 65.2
Min nTPM: 54.5
RHH5234_R3606
56.2
RHH5206_R3577
65.2
RHH5263_R3635
54.5
RHH5298_R3664
57.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
