HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:15.4 nTPM
HPA Brain:15.8 nTPM
GTEx:15.4 nTPM
FANTOM5:20.6 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:29.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041704
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
1898 Male, age 80, left hemisphere 16.5
2148 Female, age 91, left hemisphere 16.2
2529 Female, age 94, left hemisphere 14.3
1855 Male, age 76, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.9
1911 Female, age 85, right hemisphere 13.3
Dentate gyrus
nTPM: 14.8
2528 Male, age 74, both hemispheres 21.7
2530 Female, age 94, left hemisphere 17.1
2010 Male, age 76, both hemispheres 12.9
2246 Female, age 85, both hemispheres 12.8
2531 Female, age 67, both hemispheres 12.5
1927 Female, age 91, both hemispheres 11.9
Entorhinal gyrus
nTPM: 15.8
2117 Female, age 91, right hemisphere 17.6
1787 Male, age 76, left hemisphere 16.5
2613 Female, age 94, left hemisphere 16.5
1938 Female, age 85, left hemisphere 15.9
2764 Male, age 80, right hemisphere 14.6
2686 Male, age 75, right hemisphere 13.7
Hippocampus, CA1
nTPM: 13.8
2749 Male, age 80, left hemisphere 17.8
1873 Female, age 85, both hemispheres 14.1
2527 Male, age 74, both hemispheres 13.4
2082 Female, age 91, right hemisphere 12.7
2045 Male, age 76, both hemispheres 11.1
Hippocampus, CA2
nTPM: 15.7
1963 Male, age 80, left hemisphere 20.7
2437 Female, age 94, left hemisphere 16.7
2249 Male, age 74, both hemispheres 16.0
2113 Female, age 91, right hemisphere 15.6
1940 Female, age 85, left hemisphere 13.5
1892 Male, age 76, both hemispheres 12.0
Hippocampus, CA3
nTPM: 15.7
2436 Male, age 74, both hemispheres 26.4
2861 Female, age 67, both hemispheres 16.0
2137 Male, age 80, left hemisphere 14.2
1891 Female, age 85, both hemispheres 13.2
2620 Female, age 94, left hemisphere 12.9
1867 Male, age 76, both hemispheres 11.8
Parahippocampal cortex
nTPM: 13.2
1933 Female, age 85, both hemispheres 18.3
2250 Female, age 67, right hemisphere 15.8
2692 Male, age 74, both hemispheres 15.3
2532 Female, age 72, left hemisphere 13.6
2245 Female, age 91, both hemispheres 12.8
1990 Female, age 91, right hemisphere 12.2
2622 Female, age 67, right hemisphere 12.1
1850 Male, age 80, both hemispheres 11.1
2018 Male, age 76, both hemispheres 10.5
2693 Female, age 94, both hemispheres 10.1
Perirhinal gyrus
nTPM: 12.0
1794 Male, age 80, right hemisphere 14.3
1847 Female, age 91, left hemisphere 12.1
2848 Male, age 76, right hemisphere 12.1
1841 Female, age 85, right hemisphere 11.7
2521 Female, age 94, right hemisphere 10.0
Subiculum
nTPM: 15.7
2438 Female, age 94, left hemisphere 20.8
2729 Female, age 91, right hemisphere 17.1
2619 Male, age 74, both hemispheres 16.2
2042 Male, age 76, both hemispheres 15.5
1977 Female, age 85, both hemispheres 13.5
1901 Male, age 80, both hemispheres 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 26.8
Min nTPM: 1.4
Std nTPM: 3.9
Median nTPM: 14.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 26.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 26.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 25.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 25.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 24.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 23.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 23.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 23.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 23.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 22.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.6
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 19.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.6
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.3
Sample A Female 13.5
Sample B Female 10.2
Sample C Male 9.3
Sample D Male 9.4
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 14.7
Min nTPM: 8.9
Sample A Female 14.7
Sample B Female 10.9
Sample C Male 13.3
Sample D Male 8.9
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.9
Sample A Female 9.6
Sample B Female 10.5
Sample C Male 12.0
Sample D Male 8.9
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.7
Sample A Female 11.6
Sample B Female 10.7
Sample C Male 15.4
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 27.9
Min nTPM: 25.0
Sample A Male 26.2
Sample B Male 25.8
Sample C Female 27.9
Sample D Female 25.0
Hippocampal formation
nTPM: 29.2
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.4
Sample A Male 31.7
Sample B Male 27.4
Sample C Female 28.4
Sample D Female 29.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
513014 Antisense, RP_040810_01_A05, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org