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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.4
nTPM
Monaco:
95.2
nTPM
Schmiedel:
20.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.4
HPA sample
nTPM
gdT-cell nTPM: 65.1
Samples: 6
Max nTPM: 74.5
Min nTPM: 46.1
P10809_1007
46.1
P10809_1022
74.5
P10809_1041
64.4
P10809_1060
68.9
P10809_1077
62.0
P10809_1098
74.4
MAIT T-cell nTPM: 59.3
Samples: 6
Max nTPM: 79.4
Min nTPM: 37.1
P10809_1006
37.1
P10809_1024
54.0
P10809_1043
66.6
P10809_1062
59.0
P10809_1083
59.6
P10809_1097
79.4
Memory CD4 T-cell nTPM: 56.6
Samples: 6
Max nTPM: 67.4
Min nTPM: 44.4
P10809_1014
44.4
P10809_1026
54.6
P10809_1045
64.7
P10809_1064
59.1
P10809_1086
49.1
P10809_1113
67.4
Memory CD8 T-cell nTPM: 57.7
Samples: 5
Max nTPM: 68.5
Min nTPM: 48.1
P10809_1012
48.1
P10809_1027
61.3
P10809_1046
68.5
P10809_1065
51.4
P10809_1111
59.1
Naive CD4 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 64.9
Min nTPM: 31.5
P10809_1015
31.5
P10809_1030
47.0
P10809_1049
64.9
P10809_1068
52.4
P10809_1085
32.4
P10809_1112
55.1
Naive CD8 T-cell nTPM: 45.1
Samples: 6
Max nTPM: 60.3
Min nTPM: 32.5
P10809_1016
33.7
P10809_1031
32.5
P10809_1050
44.0
P10809_1069
60.3
P10809_1087
51.3
P10809_1110
48.5
T-reg nTPM: 84.4
Samples: 6
Max nTPM: 107.1
Min nTPM: 56.2
P10809_1018
70.8
P10809_1037
56.2
P10809_1056
91.0
P10809_1075
107.1
P10809_1094
106.0
P10809_1106
75.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 60.9
Samples: 4
Max nTPM: 78.5
Min nTPM: 35.8
RHH5202_R3573
61.7
RHH5230_R3602
67.4
RHH5259_R3631
35.8
RHH5288_R3660
78.5
Effector memory CD8 T-cell nTPM: 76.9
Samples: 4
Max nTPM: 90.2
Min nTPM: 49.3
RHH5203_R3574
90.2
RHH5231_R3603
82.9
RHH5260_R3632
49.3
RHH5289_R3661
85.1
MAIT T-cell nTPM: 83.3
Samples: 4
Max nTPM: 118.6
Min nTPM: 56.4
RHH5233_R3605
76.6
RHH5205_R3576
56.4
RHH5262_R3634
81.4
RHH5297_R3663
118.6
Memory CD4 T-cell TFH nTPM: 95.2
Samples: 4
Max nTPM: 135.6
Min nTPM: 69.8
RHH5300_R3666
79.1
RHH5236_R3608
135.6
RHH5265_R3637
69.8
RHH5208_R3579
96.1
Memory CD4 T-cell Th1 nTPM: 77.0
Samples: 4
Max nTPM: 126.8
Min nTPM: 51.4
RHH5210_R3581
71.8
RHH5302_R3668
126.8
RHH5238_R3610
51.4
RHH5267_R3639
58.1
Memory CD4 T-cell Th1/Th17 nTPM: 73.3
Samples: 4
Max nTPM: 114.5
Min nTPM: 35.1
RHH5303_R3669
114.5
RHH5211_R3582
88.0
RHH5239_R3611
35.1
RHH5268_R3640
55.5
Memory CD4 T-cell Th17 nTPM: 68.8
Samples: 4
Max nTPM: 95.1
Min nTPM: 40.5
RHH5304_R3670
87.1
RHH5212_R3583
95.1
RHH5240_R3612
40.5
RHH5269_R3641
52.4
Memory CD4 T-cell Th2 nTPM: 87.0
Samples: 4
Max nTPM: 100.4
Min nTPM: 68.6
RHH5305_R3671
100.4
RHH5213_R3584
92.8
RHH5241_R3613
86.0
RHH5270_R3642
68.6
Naive CD4 T-cell nTPM: 71.7
Samples: 4
Max nTPM: 91.4
Min nTPM: 49.6
RHH5306_R3672
91.4
RHH5214_R3585
80.1
RHH5242_R3614
49.6
RHH5271_R3643
65.6
Naive CD8 T-cell nTPM: 61.7
Samples: 4
Max nTPM: 89.7
Min nTPM: 26.7
RHH5201_R3572
89.7
RHH5229_R3601
26.7
RHH5258_R3630
63.0
RHH5287_R3659
67.4
Non-Vd2 gdTCR nTPM: 77.3
Samples: 4
Max nTPM: 103.6
Min nTPM: 43.8
RHH5235_R3607
43.8
RHH5264_R3636
99.0
RHH5207_R3578
62.8
RHH5299_R3665
103.6
T-reg nTPM: 80.7
Samples: 4
Max nTPM: 94.2
Min nTPM: 65.4
RHH5301_R3667
94.2
RHH5237_R3609
91.5
RHH5266_R3638
71.6
RHH5209_R3580
65.4
Terminal effector memory CD4 T-cell nTPM: 81.3
Samples: 2
Max nTPM: 104.4
Min nTPM: 58.2
RHH5243_R3615
58.2
RHH5272_R3644
104.4
Terminal effector memory CD8 T-cell nTPM: 87.2
Samples: 4
Max nTPM: 103.2
Min nTPM: 66.4
RHH5232_R3604
103.2
RHH5204_R3575
78.3
RHH5261_R3633
66.4
RHH5296_R3662
100.8
Vd2 gdTCR nTPM: 80.1
Samples: 4
Max nTPM: 104.2
Min nTPM: 46.3
RHH5234_R3606
70.2
RHH5206_R3577
99.5
RHH5263_R3635
46.3
RHH5298_R3664
104.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
