HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.6 nTPM
HPA Brain:16.2 nTPM
GTEx:15.6 nTPM
FANTOM5:18.7 Scaled Tags Per Million
Pig:31.6 nTPM
Mouse:20.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010917Antibody HPA012571
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
2621 Female, age 67, right hemisphere 24.7
1898 Male, age 80, left hemisphere 18.3
1855 Male, age 76, left hemisphere 15.9
2529 Female, age 94, left hemisphere 11.6
1911 Female, age 85, right hemisphere 11.4
2148 Female, age 91, left hemisphere 10.2
Dentate gyrus
nTPM: 12.3
2530 Female, age 94, left hemisphere 15.7
2010 Male, age 76, both hemispheres 14.7
2531 Female, age 67, both hemispheres 11.2
2528 Male, age 74, both hemispheres 10.8
1927 Female, age 91, both hemispheres 10.7
2246 Female, age 85, both hemispheres 10.5
Entorhinal gyrus
nTPM: 12.0
2117 Female, age 91, right hemisphere 24.2
1787 Male, age 76, left hemisphere 12.2
2613 Female, age 94, left hemisphere 10.0
1938 Female, age 85, left hemisphere 9.9
2764 Male, age 80, right hemisphere 9.7
2686 Male, age 75, right hemisphere 5.7
Hippocampus, CA1
nTPM: 10.2
2082 Female, age 91, right hemisphere 12.0
2045 Male, age 76, both hemispheres 11.7
1873 Female, age 85, both hemispheres 9.4
2749 Male, age 80, left hemisphere 9.4
2527 Male, age 74, both hemispheres 8.4
Hippocampus, CA2
nTPM: 16.2
1940 Female, age 85, left hemisphere 32.8
2437 Female, age 94, left hemisphere 16.7
1892 Male, age 76, both hemispheres 13.7
2113 Female, age 91, right hemisphere 12.9
1963 Male, age 80, left hemisphere 11.6
2249 Male, age 74, both hemispheres 9.5
Hippocampus, CA3
nTPM: 10.6
1867 Male, age 76, both hemispheres 18.7
2861 Female, age 67, both hemispheres 11.3
1891 Female, age 85, both hemispheres 9.5
2137 Male, age 80, left hemisphere 9.4
2436 Male, age 74, both hemispheres 7.4
2620 Female, age 94, left hemisphere 7.0
Parahippocampal cortex
nTPM: 10.3
2250 Female, age 67, right hemisphere 23.0
2018 Male, age 76, both hemispheres 13.3
2693 Female, age 94, both hemispheres 10.1
1990 Female, age 91, right hemisphere 9.8
2532 Female, age 72, left hemisphere 9.1
2245 Female, age 91, both hemispheres 8.9
1850 Male, age 80, both hemispheres 8.2
1933 Female, age 85, both hemispheres 8.2
2692 Male, age 74, both hemispheres 6.5
2622 Female, age 67, right hemisphere 5.5
Perirhinal gyrus
nTPM: 8.5
2521 Female, age 94, right hemisphere 12.6
2848 Male, age 76, right hemisphere 8.8
1794 Male, age 80, right hemisphere 8.5
1847 Female, age 91, left hemisphere 7.4
1841 Female, age 85, right hemisphere 5.4
Subiculum
nTPM: 14.6
2042 Male, age 76, both hemispheres 22.0
2729 Female, age 91, right hemisphere 20.7
1901 Male, age 80, both hemispheres 13.9
2438 Female, age 94, left hemisphere 11.6
2619 Male, age 74, both hemispheres 11.2
1977 Female, age 85, both hemispheres 8.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 70.2
Min nTPM: 0.6
Std nTPM: 11.6
Median nTPM: 12.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 70.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 52.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 52.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 49.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 47.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 47.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 42.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 41.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 39.4
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 38.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.7
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.6
Pig sample Sample description nTPM
Subiculum
nTPM: 31.1
Samples: 4

Max nTPM: 39.3
Min nTPM: 26.6
Sample A Female 39.3
Sample B Female 30.0
Sample C Male 26.6
Sample D Male 28.3
Dorsal hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 40.0
Min nTPM: 22.9
Sample A Female 40.0
Sample B Female 22.9
Sample C Male 37.2
Sample D Male 26.5
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.0
Sample A Female 23.9
Sample B Female 22.6
Sample C Male 22.0
Sample D Male 26.5
Ventral hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 34.2
Min nTPM: 26.8
Sample A Female 30.2
Sample B Female 26.8
Sample C Male 27.3
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 18.7
Sample A Male 21.0
Sample B Male 21.7
Sample C Female 18.7
Sample D Female 21.5
Hippocampal formation
nTPM: 19.1
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.6
Sample A Male 21.6
Sample B Male 16.6
Sample C Female 18.1
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
67870433 Antisense, RP_041018_01_D02, Mouse strain C57BL/6J (56 days, male) 0.7
71664133 Antisense, RP_050927_04_G04, Mouse strain C57BL/6J (56 days, male) 0.7

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