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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
133.7
nTPM
Monaco:
366.3
nTPM
Schmiedel:
108.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.7
HPA sample
nTPM
gdT-cell nTPM: 64.5
Samples: 6
Max nTPM: 90.7
Min nTPM: 34.9
P10809_1007
34.9
P10809_1022
70.5
P10809_1041
61.3
P10809_1060
78.0
P10809_1077
51.4
P10809_1098
90.7
MAIT T-cell nTPM: 78.2
Samples: 6
Max nTPM: 110.8
Min nTPM: 54.7
P10809_1006
54.7
P10809_1024
110.8
P10809_1043
76.9
P10809_1062
94.1
P10809_1083
76.9
P10809_1097
55.7
Memory CD4 T-cell nTPM: 90.9
Samples: 6
Max nTPM: 108.4
Min nTPM: 65.4
P10809_1014
65.4
P10809_1026
80.2
P10809_1045
86.1
P10809_1064
102.4
P10809_1086
102.9
P10809_1113
108.4
Memory CD8 T-cell nTPM: 68.5
Samples: 5
Max nTPM: 95.9
Min nTPM: 56.1
P10809_1012
56.1
P10809_1027
61.5
P10809_1046
63.2
P10809_1065
95.9
P10809_1111
65.8
Naive CD4 T-cell nTPM: 133.7
Samples: 6
Max nTPM: 175.9
Min nTPM: 84.0
P10809_1015
84.0
P10809_1030
155.9
P10809_1049
100.3
P10809_1068
175.9
P10809_1085
127.7
P10809_1112
158.3
Naive CD8 T-cell nTPM: 96.9
Samples: 6
Max nTPM: 137.7
Min nTPM: 74.1
P10809_1016
78.0
P10809_1031
104.6
P10809_1050
78.2
P10809_1069
109.0
P10809_1087
74.1
P10809_1110
137.7
T-reg nTPM: 37.3
Samples: 6
Max nTPM: 65.7
Min nTPM: 24.7
P10809_1018
24.7
P10809_1037
37.7
P10809_1056
30.9
P10809_1075
26.1
P10809_1094
65.7
P10809_1106
38.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
366.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 220.3
Samples: 4
Max nTPM: 266.7
Min nTPM: 143.6
RHH5202_R3573
232.1
RHH5230_R3602
143.6
RHH5259_R3631
266.7
RHH5288_R3660
238.8
Effector memory CD8 T-cell nTPM: 169.3
Samples: 4
Max nTPM: 259.6
Min nTPM: 125.3
RHH5203_R3574
125.3
RHH5231_R3603
128.0
RHH5260_R3632
259.6
RHH5289_R3661
164.4
MAIT T-cell nTPM: 191.2
Samples: 4
Max nTPM: 207.6
Min nTPM: 163.6
RHH5233_R3605
205.6
RHH5205_R3576
207.6
RHH5262_R3634
187.9
RHH5297_R3663
163.6
Memory CD4 T-cell TFH nTPM: 315.0
Samples: 4
Max nTPM: 344.1
Min nTPM: 284.3
RHH5300_R3666
284.3
RHH5236_R3608
319.2
RHH5265_R3637
344.1
RHH5208_R3579
312.3
Memory CD4 T-cell Th1 nTPM: 265.9
Samples: 4
Max nTPM: 298.7
Min nTPM: 241.1
RHH5210_R3581
253.8
RHH5302_R3668
270.0
RHH5238_R3610
241.1
RHH5267_R3639
298.7
Memory CD4 T-cell Th1/Th17 nTPM: 252.8
Samples: 4
Max nTPM: 301.5
Min nTPM: 225.0
RHH5303_R3669
238.7
RHH5211_R3582
225.0
RHH5239_R3611
301.5
RHH5268_R3640
246.0
Memory CD4 T-cell Th17 nTPM: 289.8
Samples: 4
Max nTPM: 319.6
Min nTPM: 261.1
RHH5304_R3670
280.9
RHH5212_R3583
261.1
RHH5240_R3612
319.6
RHH5269_R3641
297.7
Memory CD4 T-cell Th2 nTPM: 245.0
Samples: 4
Max nTPM: 281.5
Min nTPM: 189.2
RHH5305_R3671
258.9
RHH5213_R3584
250.4
RHH5241_R3613
189.2
RHH5270_R3642
281.5
Naive CD4 T-cell nTPM: 320.3
Samples: 4
Max nTPM: 404.1
Min nTPM: 260.7
RHH5306_R3672
335.7
RHH5214_R3585
280.5
RHH5242_R3614
260.7
RHH5271_R3643
404.1
Naive CD8 T-cell nTPM: 366.3
Samples: 4
Max nTPM: 387.2
Min nTPM: 319.7
RHH5201_R3572
319.7
RHH5229_R3601
387.2
RHH5258_R3630
379.0
RHH5287_R3659
379.4
Non-Vd2 gdTCR nTPM: 118.4
Samples: 4
Max nTPM: 160.1
Min nTPM: 72.5
RHH5235_R3607
160.1
RHH5264_R3636
135.8
RHH5207_R3578
105.3
RHH5299_R3665
72.5
T-reg nTPM: 188.6
Samples: 4
Max nTPM: 220.8
Min nTPM: 154.0
RHH5301_R3667
184.3
RHH5237_R3609
154.0
RHH5266_R3638
220.8
RHH5209_R3580
195.3
Terminal effector memory CD4 T-cell nTPM: 268.6
Samples: 2
Max nTPM: 306.1
Min nTPM: 231.1
RHH5243_R3615
231.1
RHH5272_R3644
306.1
Terminal effector memory CD8 T-cell nTPM: 117.6
Samples: 4
Max nTPM: 192.6
Min nTPM: 69.8
RHH5232_R3604
104.7
RHH5204_R3575
69.8
RHH5261_R3633
192.6
RHH5296_R3662
103.2
Vd2 gdTCR nTPM: 164.0
Samples: 4
Max nTPM: 269.4
Min nTPM: 126.5
RHH5234_R3606
129.3
RHH5206_R3577
126.5
RHH5263_R3635
269.4
RHH5298_R3664
130.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
