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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.7
nTPM
Monaco:
43.0
nTPM
Schmiedel:
37.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.7
HPA sample
nTPM
gdT-cell nTPM: 38.4
Samples: 6
Max nTPM: 52.6
Min nTPM: 25.5
P10809_1007
25.5
P10809_1022
32.6
P10809_1041
50.7
P10809_1060
34.3
P10809_1077
52.6
P10809_1098
34.9
MAIT T-cell nTPM: 24.9
Samples: 6
Max nTPM: 32.7
Min nTPM: 13.6
P10809_1006
13.6
P10809_1024
32.7
P10809_1043
23.9
P10809_1062
22.3
P10809_1083
27.3
P10809_1097
29.6
Memory CD4 T-cell nTPM: 48.9
Samples: 6
Max nTPM: 57.7
Min nTPM: 31.6
P10809_1014
31.6
P10809_1026
54.5
P10809_1045
57.7
P10809_1064
50.1
P10809_1086
53.9
P10809_1113
45.5
Memory CD8 T-cell nTPM: 40.4
Samples: 5
Max nTPM: 52.4
Min nTPM: 27.3
P10809_1012
27.3
P10809_1027
40.7
P10809_1046
45.2
P10809_1065
52.4
P10809_1111
36.6
Naive CD4 T-cell nTPM: 37.1
Samples: 6
Max nTPM: 45.4
Min nTPM: 26.5
P10809_1015
26.5
P10809_1030
36.2
P10809_1049
45.2
P10809_1068
35.6
P10809_1085
45.4
P10809_1112
33.5
Naive CD8 T-cell nTPM: 39.6
Samples: 6
Max nTPM: 55.2
Min nTPM: 24.6
P10809_1016
24.6
P10809_1031
33.9
P10809_1050
38.5
P10809_1069
52.5
P10809_1087
55.2
P10809_1110
32.6
T-reg nTPM: 66.7
Samples: 6
Max nTPM: 91.9
Min nTPM: 43.3
P10809_1018
43.3
P10809_1037
68.7
P10809_1056
84.1
P10809_1075
51.7
P10809_1094
60.6
P10809_1106
91.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.4
Samples: 4
Max nTPM: 36.6
Min nTPM: 16.2
RHH5202_R3573
23.0
RHH5230_R3602
16.2
RHH5259_R3631
21.7
RHH5288_R3660
36.6
Effector memory CD8 T-cell nTPM: 29.6
Samples: 4
Max nTPM: 35.5
Min nTPM: 24.5
RHH5203_R3574
26.7
RHH5231_R3603
31.8
RHH5260_R3632
24.5
RHH5289_R3661
35.5
MAIT T-cell nTPM: 16.2
Samples: 4
Max nTPM: 24.1
Min nTPM: 11.8
RHH5233_R3605
14.6
RHH5205_R3576
14.3
RHH5262_R3634
11.8
RHH5297_R3663
24.1
Memory CD4 T-cell TFH nTPM: 31.9
Samples: 4
Max nTPM: 46.3
Min nTPM: 18.6
RHH5300_R3666
35.3
RHH5236_R3608
46.3
RHH5265_R3637
27.2
RHH5208_R3579
18.6
Memory CD4 T-cell Th1 nTPM: 26.7
Samples: 4
Max nTPM: 48.3
Min nTPM: 18.3
RHH5210_R3581
19.3
RHH5302_R3668
48.3
RHH5238_R3610
21.0
RHH5267_R3639
18.3
Memory CD4 T-cell Th1/Th17 nTPM: 24.9
Samples: 4
Max nTPM: 47.0
Min nTPM: 12.5
RHH5303_R3669
47.0
RHH5211_R3582
25.0
RHH5239_R3611
15.1
RHH5268_R3640
12.5
Memory CD4 T-cell Th17 nTPM: 24.9
Samples: 4
Max nTPM: 36.2
Min nTPM: 15.0
RHH5304_R3670
19.6
RHH5212_R3583
28.8
RHH5240_R3612
36.2
RHH5269_R3641
15.0
Memory CD4 T-cell Th2 nTPM: 29.3
Samples: 4
Max nTPM: 52.4
Min nTPM: 17.9
RHH5305_R3671
24.9
RHH5213_R3584
21.9
RHH5241_R3613
52.4
RHH5270_R3642
17.9
Naive CD4 T-cell nTPM: 19.4
Samples: 4
Max nTPM: 23.1
Min nTPM: 10.1
RHH5306_R3672
21.3
RHH5214_R3585
22.9
RHH5242_R3614
23.1
RHH5271_R3643
10.1
Naive CD8 T-cell nTPM: 22.6
Samples: 4
Max nTPM: 31.1
Min nTPM: 17.8
RHH5201_R3572
17.8
RHH5229_R3601
21.6
RHH5258_R3630
31.1
RHH5287_R3659
20.0
Non-Vd2 gdTCR nTPM: 36.0
Samples: 4
Max nTPM: 50.9
Min nTPM: 14.0
RHH5235_R3607
14.0
RHH5264_R3636
50.9
RHH5207_R3578
30.5
RHH5299_R3665
48.6
T-reg nTPM: 32.7
Samples: 4
Max nTPM: 45.4
Min nTPM: 21.5
RHH5301_R3667
37.1
RHH5237_R3609
45.4
RHH5266_R3638
26.8
RHH5209_R3580
21.5
Terminal effector memory CD4 T-cell nTPM: 25.4
Samples: 2
Max nTPM: 31.3
Min nTPM: 19.5
RHH5243_R3615
19.5
RHH5272_R3644
31.3
Terminal effector memory CD8 T-cell nTPM: 43.1
Samples: 4
Max nTPM: 61.1
Min nTPM: 29.6
RHH5232_R3604
35.4
RHH5204_R3575
61.1
RHH5261_R3633
29.6
RHH5296_R3662
46.2
Vd2 gdTCR nTPM: 21.8
Samples: 4
Max nTPM: 32.6
Min nTPM: 16.4
RHH5234_R3606
20.9
RHH5206_R3577
32.6
RHH5263_R3635
17.4
RHH5298_R3664
16.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
