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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.7
nTPM
Monaco:
169.0
nTPM
Schmiedel:
370.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.7
HPA sample
nTPM
gdT-cell nTPM: 17.0
Samples: 6
Max nTPM: 23.2
Min nTPM: 8.6
P10809_1007
14.8
P10809_1022
17.4
P10809_1041
8.6
P10809_1060
23.2
P10809_1077
19.0
P10809_1098
19.2
MAIT T-cell nTPM: 18.2
Samples: 6
Max nTPM: 22.4
Min nTPM: 12.7
P10809_1006
21.5
P10809_1024
17.4
P10809_1043
17.3
P10809_1062
22.4
P10809_1083
12.7
P10809_1097
17.8
Memory CD4 T-cell nTPM: 20.5
Samples: 6
Max nTPM: 23.9
Min nTPM: 18.9
P10809_1014
18.9
P10809_1026
19.4
P10809_1045
19.7
P10809_1064
19.6
P10809_1086
21.4
P10809_1113
23.9
Memory CD8 T-cell nTPM: 20.2
Samples: 5
Max nTPM: 24.1
Min nTPM: 16.1
P10809_1012
21.3
P10809_1027
21.2
P10809_1046
16.1
P10809_1065
24.1
P10809_1111
18.2
Naive CD4 T-cell nTPM: 25.7
Samples: 6
Max nTPM: 33.8
Min nTPM: 16.5
P10809_1015
30.5
P10809_1030
33.8
P10809_1049
16.5
P10809_1068
28.3
P10809_1085
24.1
P10809_1112
21.2
Naive CD8 T-cell nTPM: 21.6
Samples: 6
Max nTPM: 26.4
Min nTPM: 18.8
P10809_1016
25.6
P10809_1031
20.5
P10809_1050
19.1
P10809_1069
26.4
P10809_1087
18.8
P10809_1110
19.4
T-reg nTPM: 20.3
Samples: 6
Max nTPM: 28.2
Min nTPM: 15.2
P10809_1018
17.2
P10809_1037
19.3
P10809_1056
15.2
P10809_1075
28.2
P10809_1094
25.3
P10809_1106
16.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.2
Samples: 4
Max nTPM: 160.6
Min nTPM: 107.9
RHH5202_R3573
159.2
RHH5230_R3602
160.6
RHH5259_R3631
107.9
RHH5288_R3660
152.9
Effector memory CD8 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 152.1
Min nTPM: 91.0
RHH5203_R3574
130.8
RHH5231_R3603
98.3
RHH5260_R3632
91.0
RHH5289_R3661
152.1
MAIT T-cell nTPM: 140.4
Samples: 4
Max nTPM: 156.7
Min nTPM: 121.6
RHH5233_R3605
156.7
RHH5205_R3576
121.6
RHH5262_R3634
136.0
RHH5297_R3663
147.2
Memory CD4 T-cell TFH nTPM: 154.7
Samples: 4
Max nTPM: 176.8
Min nTPM: 136.3
RHH5300_R3666
156.1
RHH5236_R3608
136.3
RHH5265_R3637
149.4
RHH5208_R3579
176.8
Memory CD4 T-cell Th1 nTPM: 142.0
Samples: 4
Max nTPM: 162.3
Min nTPM: 115.0
RHH5210_R3581
148.8
RHH5302_R3668
162.3
RHH5238_R3610
115.0
RHH5267_R3639
141.8
Memory CD4 T-cell Th1/Th17 nTPM: 134.3
Samples: 4
Max nTPM: 150.0
Min nTPM: 110.7
RHH5303_R3669
150.0
RHH5211_R3582
142.6
RHH5239_R3611
133.7
RHH5268_R3640
110.7
Memory CD4 T-cell Th17 nTPM: 131.6
Samples: 4
Max nTPM: 156.3
Min nTPM: 98.3
RHH5304_R3670
149.4
RHH5212_R3583
98.3
RHH5240_R3612
156.3
RHH5269_R3641
122.4
Memory CD4 T-cell Th2 nTPM: 169.0
Samples: 4
Max nTPM: 211.5
Min nTPM: 151.4
RHH5305_R3671
159.4
RHH5213_R3584
151.4
RHH5241_R3613
211.5
RHH5270_R3642
153.7
Naive CD4 T-cell nTPM: 166.1
Samples: 4
Max nTPM: 197.5
Min nTPM: 152.5
RHH5306_R3672
154.7
RHH5214_R3585
159.8
RHH5242_R3614
197.5
RHH5271_R3643
152.5
Naive CD8 T-cell nTPM: 159.3
Samples: 4
Max nTPM: 204.5
Min nTPM: 76.6
RHH5201_R3572
204.5
RHH5229_R3601
76.6
RHH5258_R3630
171.9
RHH5287_R3659
184.3
Non-Vd2 gdTCR nTPM: 119.9
Samples: 4
Max nTPM: 148.5
Min nTPM: 93.9
RHH5235_R3607
93.9
RHH5264_R3636
119.4
RHH5207_R3578
148.5
RHH5299_R3665
117.7
T-reg nTPM: 150.6
Samples: 4
Max nTPM: 161.4
Min nTPM: 138.9
RHH5301_R3667
161.4
RHH5237_R3609
156.6
RHH5266_R3638
145.4
RHH5209_R3580
138.9
Terminal effector memory CD4 T-cell nTPM: 148.6
Samples: 2
Max nTPM: 173.5
Min nTPM: 123.7
RHH5243_R3615
123.7
RHH5272_R3644
173.5
Terminal effector memory CD8 T-cell nTPM: 137.2
Samples: 4
Max nTPM: 166.6
Min nTPM: 86.2
RHH5232_R3604
166.6
RHH5204_R3575
147.6
RHH5261_R3633
86.2
RHH5296_R3662
148.2
Vd2 gdTCR nTPM: 130.4
Samples: 4
Max nTPM: 152.0
Min nTPM: 97.6
RHH5234_R3606
152.0
RHH5206_R3577
126.6
RHH5263_R3635
97.6
RHH5298_R3664
145.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
