We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.3
nTPM
Monaco:
154.6
nTPM
Schmiedel:
95.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.3
HPA sample
nTPM
gdT-cell nTPM: 50.2
Samples: 6
Max nTPM: 69.0
Min nTPM: 29.4
P10809_1007
57.8
P10809_1022
69.0
P10809_1041
29.4
P10809_1060
39.2
P10809_1077
55.8
P10809_1098
50.0
MAIT T-cell nTPM: 63.3
Samples: 6
Max nTPM: 85.5
Min nTPM: 32.0
P10809_1006
85.5
P10809_1024
71.8
P10809_1043
32.0
P10809_1062
68.5
P10809_1083
59.9
P10809_1097
61.8
Memory CD4 T-cell nTPM: 34.3
Samples: 6
Max nTPM: 42.6
Min nTPM: 25.7
P10809_1014
39.9
P10809_1026
30.5
P10809_1045
25.7
P10809_1064
42.6
P10809_1086
34.8
P10809_1113
32.1
Memory CD8 T-cell nTPM: 41.0
Samples: 5
Max nTPM: 47.8
Min nTPM: 32.2
P10809_1012
47.8
P10809_1027
32.2
P10809_1046
43.7
P10809_1065
44.3
P10809_1111
37.1
Naive CD4 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 22.7
Min nTPM: 14.2
P10809_1015
17.9
P10809_1030
14.2
P10809_1049
16.0
P10809_1068
20.6
P10809_1085
22.7
P10809_1112
21.5
Naive CD8 T-cell nTPM: 33.6
Samples: 6
Max nTPM: 52.7
Min nTPM: 24.6
P10809_1016
24.6
P10809_1031
36.8
P10809_1050
26.2
P10809_1069
33.2
P10809_1087
52.7
P10809_1110
28.1
T-reg nTPM: 52.4
Samples: 6
Max nTPM: 88.0
Min nTPM: 28.1
P10809_1018
54.2
P10809_1037
28.1
P10809_1056
54.0
P10809_1075
50.1
P10809_1094
88.0
P10809_1106
40.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.6
Samples: 4
Max nTPM: 89.9
Min nTPM: 47.4
RHH5202_R3573
77.4
RHH5230_R3602
89.9
RHH5259_R3631
47.4
RHH5288_R3660
71.6
Effector memory CD8 T-cell nTPM: 130.7
Samples: 4
Max nTPM: 163.7
Min nTPM: 107.8
RHH5203_R3574
163.7
RHH5231_R3603
113.6
RHH5260_R3632
107.8
RHH5289_R3661
137.8
MAIT T-cell nTPM: 154.6
Samples: 4
Max nTPM: 214.0
Min nTPM: 110.2
RHH5233_R3605
158.1
RHH5205_R3576
214.0
RHH5262_R3634
110.2
RHH5297_R3663
136.1
Memory CD4 T-cell TFH nTPM: 65.7
Samples: 4
Max nTPM: 91.8
Min nTPM: 53.6
RHH5300_R3666
53.6
RHH5236_R3608
58.2
RHH5265_R3637
59.0
RHH5208_R3579
91.8
Memory CD4 T-cell Th1 nTPM: 73.4
Samples: 4
Max nTPM: 85.7
Min nTPM: 67.2
RHH5210_R3581
85.7
RHH5302_R3668
68.5
RHH5238_R3610
67.2
RHH5267_R3639
72.0
Memory CD4 T-cell Th1/Th17 nTPM: 104.9
Samples: 4
Max nTPM: 141.7
Min nTPM: 72.5
RHH5303_R3669
121.2
RHH5211_R3582
141.7
RHH5239_R3611
84.1
RHH5268_R3640
72.5
Memory CD4 T-cell Th17 nTPM: 106.8
Samples: 4
Max nTPM: 129.4
Min nTPM: 76.4
RHH5304_R3670
124.7
RHH5212_R3583
96.6
RHH5240_R3612
129.4
RHH5269_R3641
76.4
Memory CD4 T-cell Th2 nTPM: 55.1
Samples: 4
Max nTPM: 60.9
Min nTPM: 46.2
RHH5305_R3671
57.8
RHH5213_R3584
60.9
RHH5241_R3613
55.5
RHH5270_R3642
46.2
Naive CD4 T-cell nTPM: 46.8
Samples: 4
Max nTPM: 48.6
Min nTPM: 44.2
RHH5306_R3672
48.6
RHH5214_R3585
44.2
RHH5242_R3614
47.5
RHH5271_R3643
46.9
Naive CD8 T-cell nTPM: 39.9
Samples: 4
Max nTPM: 50.0
Min nTPM: 30.3
RHH5201_R3572
50.0
RHH5229_R3601
30.3
RHH5258_R3630
31.2
RHH5287_R3659
48.1
Non-Vd2 gdTCR nTPM: 121.4
Samples: 4
Max nTPM: 149.4
Min nTPM: 98.9
RHH5235_R3607
131.3
RHH5264_R3636
105.9
RHH5207_R3578
149.4
RHH5299_R3665
98.9
T-reg nTPM: 53.0
Samples: 4
Max nTPM: 63.9
Min nTPM: 40.2
RHH5301_R3667
59.5
RHH5237_R3609
40.2
RHH5266_R3638
48.4
RHH5209_R3580
63.9
Terminal effector memory CD4 T-cell nTPM: 84.8
Samples: 2
Max nTPM: 86.7
Min nTPM: 82.8
RHH5243_R3615
86.7
RHH5272_R3644
82.8
Terminal effector memory CD8 T-cell nTPM: 126.6
Samples: 4
Max nTPM: 135.1
Min nTPM: 116.5
RHH5232_R3604
116.5
RHH5204_R3575
128.4
RHH5261_R3633
135.1
RHH5296_R3662
126.2
Vd2 gdTCR nTPM: 105.4
Samples: 4
Max nTPM: 141.9
Min nTPM: 76.4
RHH5234_R3606
110.9
RHH5206_R3577
141.9
RHH5263_R3635
92.2
RHH5298_R3664
76.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
