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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.6
nTPM
Monaco:
127.7
nTPM
Schmiedel:
80.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.6
HPA sample
nTPM
gdT-cell nTPM: 43.1
Samples: 6
Max nTPM: 53.3
Min nTPM: 35.9
P10809_1007
37.3
P10809_1022
53.3
P10809_1041
35.9
P10809_1060
40.7
P10809_1077
49.5
P10809_1098
41.9
MAIT T-cell nTPM: 42.5
Samples: 6
Max nTPM: 62.3
Min nTPM: 33.3
P10809_1006
44.7
P10809_1024
62.3
P10809_1043
35.6
P10809_1062
40.2
P10809_1083
39.0
P10809_1097
33.3
Memory CD4 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 48.6
Min nTPM: 31.3
P10809_1014
36.1
P10809_1026
48.6
P10809_1045
38.6
P10809_1064
44.7
P10809_1086
42.7
P10809_1113
31.3
Memory CD8 T-cell nTPM: 43.8
Samples: 5
Max nTPM: 58.2
Min nTPM: 36.1
P10809_1012
39.4
P10809_1027
58.2
P10809_1046
36.1
P10809_1065
45.4
P10809_1111
39.8
Naive CD4 T-cell nTPM: 19.1
Samples: 6
Max nTPM: 23.5
Min nTPM: 16.3
P10809_1015
21.5
P10809_1030
16.3
P10809_1049
19.1
P10809_1068
17.3
P10809_1085
23.5
P10809_1112
17.0
Naive CD8 T-cell nTPM: 34.5
Samples: 6
Max nTPM: 47.1
Min nTPM: 18.0
P10809_1016
23.9
P10809_1031
47.1
P10809_1050
34.6
P10809_1069
37.6
P10809_1087
45.5
P10809_1110
18.0
T-reg nTPM: 65.6
Samples: 6
Max nTPM: 81.4
Min nTPM: 53.7
P10809_1018
53.7
P10809_1037
54.8
P10809_1056
77.2
P10809_1075
81.4
P10809_1094
67.3
P10809_1106
59.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.1
Samples: 4
Max nTPM: 101.4
Min nTPM: 66.1
RHH5202_R3573
89.0
RHH5230_R3602
66.1
RHH5259_R3631
67.9
RHH5288_R3660
101.4
Effector memory CD8 T-cell nTPM: 126.5
Samples: 4
Max nTPM: 164.7
Min nTPM: 99.8
RHH5203_R3574
164.7
RHH5231_R3603
110.8
RHH5260_R3632
99.8
RHH5289_R3661
130.7
MAIT T-cell nTPM: 109.0
Samples: 4
Max nTPM: 127.7
Min nTPM: 93.1
RHH5233_R3605
127.7
RHH5205_R3576
93.1
RHH5262_R3634
100.7
RHH5297_R3663
114.3
Memory CD4 T-cell TFH nTPM: 69.5
Samples: 4
Max nTPM: 98.9
Min nTPM: 48.8
RHH5300_R3666
68.2
RHH5236_R3608
62.0
RHH5265_R3637
98.9
RHH5208_R3579
48.8
Memory CD4 T-cell Th1 nTPM: 77.6
Samples: 4
Max nTPM: 92.5
Min nTPM: 56.2
RHH5210_R3581
56.2
RHH5302_R3668
90.9
RHH5238_R3610
70.9
RHH5267_R3639
92.5
Memory CD4 T-cell Th1/Th17 nTPM: 89.6
Samples: 4
Max nTPM: 110.0
Min nTPM: 72.7
RHH5303_R3669
110.0
RHH5211_R3582
99.2
RHH5239_R3611
76.4
RHH5268_R3640
72.7
Memory CD4 T-cell Th17 nTPM: 84.2
Samples: 4
Max nTPM: 95.9
Min nTPM: 75.3
RHH5304_R3670
89.4
RHH5212_R3583
75.3
RHH5240_R3612
76.1
RHH5269_R3641
95.9
Memory CD4 T-cell Th2 nTPM: 101.8
Samples: 4
Max nTPM: 110.6
Min nTPM: 96.0
RHH5305_R3671
96.0
RHH5213_R3584
98.2
RHH5241_R3613
102.3
RHH5270_R3642
110.6
Naive CD4 T-cell nTPM: 52.3
Samples: 4
Max nTPM: 62.8
Min nTPM: 41.9
RHH5306_R3672
57.2
RHH5214_R3585
47.4
RHH5242_R3614
41.9
RHH5271_R3643
62.8
Naive CD8 T-cell nTPM: 48.5
Samples: 4
Max nTPM: 51.0
Min nTPM: 43.2
RHH5201_R3572
49.3
RHH5229_R3601
43.2
RHH5258_R3630
50.6
RHH5287_R3659
51.0
Non-Vd2 gdTCR nTPM: 124.5
Samples: 4
Max nTPM: 142.1
Min nTPM: 107.4
RHH5235_R3607
107.4
RHH5264_R3636
142.1
RHH5207_R3578
136.1
RHH5299_R3665
112.3
T-reg nTPM: 85.8
Samples: 4
Max nTPM: 102.6
Min nTPM: 75.9
RHH5301_R3667
87.0
RHH5237_R3609
102.6
RHH5266_R3638
77.7
RHH5209_R3580
75.9
Terminal effector memory CD4 T-cell nTPM: 114.8
Samples: 2
Max nTPM: 141.5
Min nTPM: 88.0
RHH5243_R3615
88.0
RHH5272_R3644
141.5
Terminal effector memory CD8 T-cell nTPM: 127.7
Samples: 4
Max nTPM: 144.2
Min nTPM: 115.7
RHH5232_R3604
144.2
RHH5204_R3575
123.7
RHH5261_R3633
127.2
RHH5296_R3662
115.7
Vd2 gdTCR nTPM: 115.6
Samples: 4
Max nTPM: 149.4
Min nTPM: 87.2
RHH5234_R3606
125.6
RHH5206_R3577
149.4
RHH5263_R3635
100.3
RHH5298_R3664
87.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
