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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
139.3
nTPM
Monaco:
883.4
nTPM
Schmiedel:
500.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.3
HPA sample
nTPM
gdT-cell nTPM: 28.6
Samples: 6
Max nTPM: 47.2
Min nTPM: 18.2
P10809_1007
19.2
P10809_1022
29.0
P10809_1041
28.1
P10809_1060
47.2
P10809_1077
30.0
P10809_1098
18.2
MAIT T-cell nTPM: 55.4
Samples: 6
Max nTPM: 71.5
Min nTPM: 28.1
P10809_1006
61.3
P10809_1024
61.9
P10809_1043
51.1
P10809_1062
71.5
P10809_1083
58.4
P10809_1097
28.1
Memory CD4 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 62.7
Min nTPM: 43.8
P10809_1014
49.9
P10809_1026
62.7
P10809_1045
61.7
P10809_1064
43.8
P10809_1086
48.6
P10809_1113
55.9
Memory CD8 T-cell nTPM: 32.7
Samples: 5
Max nTPM: 43.3
Min nTPM: 21.6
P10809_1012
43.3
P10809_1027
21.6
P10809_1046
35.3
P10809_1065
35.4
P10809_1111
27.7
Naive CD4 T-cell nTPM: 139.3
Samples: 6
Max nTPM: 205.0
Min nTPM: 107.2
P10809_1015
131.1
P10809_1030
107.2
P10809_1049
135.2
P10809_1068
205.0
P10809_1085
119.6
P10809_1112
137.6
Naive CD8 T-cell nTPM: 91.2
Samples: 6
Max nTPM: 134.5
Min nTPM: 21.1
P10809_1016
129.7
P10809_1031
134.5
P10809_1050
80.3
P10809_1069
95.1
P10809_1087
21.1
P10809_1110
86.4
T-reg nTPM: 32.7
Samples: 6
Max nTPM: 51.8
Min nTPM: 19.9
P10809_1018
19.9
P10809_1037
32.7
P10809_1056
27.9
P10809_1075
43.2
P10809_1094
51.8
P10809_1106
20.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
883.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 349.9
Samples: 4
Max nTPM: 404.5
Min nTPM: 245.1
RHH5202_R3573
404.5
RHH5230_R3602
387.5
RHH5259_R3631
245.1
RHH5288_R3660
362.3
Effector memory CD8 T-cell nTPM: 171.5
Samples: 4
Max nTPM: 255.5
Min nTPM: 97.7
RHH5203_R3574
255.5
RHH5231_R3603
97.7
RHH5260_R3632
136.8
RHH5289_R3661
196.1
MAIT T-cell nTPM: 255.7
Samples: 4
Max nTPM: 319.3
Min nTPM: 197.9
RHH5233_R3605
306.4
RHH5205_R3576
319.3
RHH5262_R3634
197.9
RHH5297_R3663
199.1
Memory CD4 T-cell TFH nTPM: 438.5
Samples: 4
Max nTPM: 476.0
Min nTPM: 378.0
RHH5300_R3666
378.0
RHH5236_R3608
435.6
RHH5265_R3637
464.4
RHH5208_R3579
476.0
Memory CD4 T-cell Th1 nTPM: 466.3
Samples: 4
Max nTPM: 697.0
Min nTPM: 359.5
RHH5210_R3581
697.0
RHH5302_R3668
408.1
RHH5238_R3610
359.5
RHH5267_R3639
400.6
Memory CD4 T-cell Th1/Th17 nTPM: 347.3
Samples: 4
Max nTPM: 430.0
Min nTPM: 287.0
RHH5303_R3669
333.5
RHH5211_R3582
338.8
RHH5239_R3611
430.0
RHH5268_R3640
287.0
Memory CD4 T-cell Th17 nTPM: 357.7
Samples: 4
Max nTPM: 412.4
Min nTPM: 299.4
RHH5304_R3670
412.4
RHH5212_R3583
299.4
RHH5240_R3612
367.3
RHH5269_R3641
351.7
Memory CD4 T-cell Th2 nTPM: 390.5
Samples: 4
Max nTPM: 441.3
Min nTPM: 349.7
RHH5305_R3671
406.4
RHH5213_R3584
349.7
RHH5241_R3613
441.3
RHH5270_R3642
364.5
Naive CD4 T-cell nTPM: 854.3
Samples: 4
Max nTPM: 1041.7
Min nTPM: 766.6
RHH5306_R3672
800.1
RHH5214_R3585
766.6
RHH5242_R3614
1041.7
RHH5271_R3643
808.9
Naive CD8 T-cell nTPM: 883.4
Samples: 4
Max nTPM: 1004.9
Min nTPM: 744.4
RHH5201_R3572
1004.9
RHH5229_R3601
744.4
RHH5258_R3630
881.3
RHH5287_R3659
903.1
Non-Vd2 gdTCR nTPM: 140.6
Samples: 4
Max nTPM: 227.3
Min nTPM: 101.3
RHH5235_R3607
227.3
RHH5264_R3636
101.3
RHH5207_R3578
111.4
RHH5299_R3665
122.4
T-reg nTPM: 372.8
Samples: 4
Max nTPM: 405.5
Min nTPM: 337.2
RHH5301_R3667
337.2
RHH5237_R3609
405.5
RHH5266_R3638
352.0
RHH5209_R3580
396.4
Terminal effector memory CD4 T-cell nTPM: 239.9
Samples: 2
Max nTPM: 256.4
Min nTPM: 223.3
RHH5243_R3615
256.4
RHH5272_R3644
223.3
Terminal effector memory CD8 T-cell nTPM: 144.1
Samples: 4
Max nTPM: 162.1
Min nTPM: 108.8
RHH5232_R3604
162.1
RHH5204_R3575
156.5
RHH5261_R3633
108.8
RHH5296_R3662
148.8
Vd2 gdTCR nTPM: 231.4
Samples: 4
Max nTPM: 252.8
Min nTPM: 191.7
RHH5234_R3606
252.8
RHH5206_R3577
191.7
RHH5263_R3635
240.1
RHH5298_R3664
240.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
