HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:27.5 nTPM
HPA Brain:32.1 nTPM
GTEx:27.5 nTPM
FANTOM5:202.5 Scaled Tags Per Million
Pig:80.8 nTPM
Mouse:157.0 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025928
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.1
Sample id Sample description nTPM
Hippocampus
nTPM: 28.9
1898 Male, age 80, left hemisphere 43.4
1911 Female, age 85, right hemisphere 31.9
1855 Male, age 76, left hemisphere 27.9
2148 Female, age 91, left hemisphere 25.9
2621 Female, age 67, right hemisphere 24.4
2529 Female, age 94, left hemisphere 19.7
Dentate gyrus
nTPM: 31.9
2528 Male, age 74, both hemispheres 41.4
1927 Female, age 91, both hemispheres 38.6
2010 Male, age 76, both hemispheres 34.0
2530 Female, age 94, left hemisphere 29.0
2246 Female, age 85, both hemispheres 25.1
2531 Female, age 67, both hemispheres 23.1
Entorhinal gyrus
nTPM: 24.2
2117 Female, age 91, right hemisphere 31.1
2686 Male, age 75, right hemisphere 26.0
1938 Female, age 85, left hemisphere 25.8
1787 Male, age 76, left hemisphere 25.1
2764 Male, age 80, right hemisphere 18.8
2613 Female, age 94, left hemisphere 18.7
Hippocampus, CA1
nTPM: 32.1
2749 Male, age 80, left hemisphere 39.1
2082 Female, age 91, right hemisphere 35.4
1873 Female, age 85, both hemispheres 32.5
2045 Male, age 76, both hemispheres 29.7
2527 Male, age 74, both hemispheres 23.8
Hippocampus, CA2
nTPM: 28.9
1963 Male, age 80, left hemisphere 36.1
1892 Male, age 76, both hemispheres 34.5
2249 Male, age 74, both hemispheres 29.9
2113 Female, age 91, right hemisphere 28.4
2437 Female, age 94, left hemisphere 24.5
1940 Female, age 85, left hemisphere 20.0
Hippocampus, CA3
nTPM: 31.3
1867 Male, age 76, both hemispheres 37.0
2620 Female, age 94, left hemisphere 35.3
1891 Female, age 85, both hemispheres 34.4
2137 Male, age 80, left hemisphere 31.6
2436 Male, age 74, both hemispheres 28.4
2861 Female, age 67, both hemispheres 21.3
Parahippocampal cortex
nTPM: 29.0
2018 Male, age 76, both hemispheres 39.9
1933 Female, age 85, both hemispheres 32.3
1850 Male, age 80, both hemispheres 31.6
2693 Female, age 94, both hemispheres 31.4
1990 Female, age 91, right hemisphere 30.7
2250 Female, age 67, right hemisphere 30.7
2692 Male, age 74, both hemispheres 28.3
2245 Female, age 91, both hemispheres 27.7
2622 Female, age 67, right hemisphere 21.4
2532 Female, age 72, left hemisphere 16.3
Perirhinal gyrus
nTPM: 28.4
1847 Female, age 91, left hemisphere 37.4
1841 Female, age 85, right hemisphere 34.5
1794 Male, age 80, right hemisphere 31.3
2521 Female, age 94, right hemisphere 22.7
2848 Male, age 76, right hemisphere 16.3
Subiculum
nTPM: 24.7
1901 Male, age 80, both hemispheres 33.9
1977 Female, age 85, both hemispheres 30.9
2729 Female, age 91, right hemisphere 28.6
2042 Male, age 76, both hemispheres 26.3
2619 Male, age 74, both hemispheres 17.5
2438 Female, age 94, left hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.5
Samples: 197

Max nTPM: 43.1
Min nTPM: 15.6
Std nTPM: 6.0
Median nTPM: 26.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 42.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 41.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 41.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 41.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 41.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 39.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 39.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 38.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 202.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.5
FF:10169-103B7 60 years, female 257.5
FF:10153-102I9 76 years, female 147.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.8
Pig sample Sample description nTPM
Subiculum
nTPM: 74.2
Samples: 4

Max nTPM: 85.8
Min nTPM: 66.6
Sample A Female 85.8
Sample B Female 72.7
Sample C Male 66.6
Sample D Male 71.5
Dorsal hippocampus
nTPM: 80.8
Samples: 4

Max nTPM: 98.1
Min nTPM: 62.3
Sample A Female 98.1
Sample B Female 79.9
Sample C Male 83.0
Sample D Male 62.3
Entorhinal cortex
nTPM: 78.5
Samples: 4

Max nTPM: 97.6
Min nTPM: 61.8
Sample A Female 71.0
Sample B Female 97.6
Sample C Male 83.7
Sample D Male 61.8
Ventral hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 72.6
Min nTPM: 67.0
Sample A Female 72.6
Sample B Female 67.5
Sample C Male 67.0
Sample D Male 69.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 157.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.9
Samples: 4

Max nTPM: 151.7
Min nTPM: 136.2
Sample A Male 136.2
Sample B Male 151.7
Sample C Female 148.8
Sample D Female 150.8
Hippocampal formation
nTPM: 157.0
Samples: 4

Max nTPM: 164.7
Min nTPM: 148.5
Sample A Male 164.7
Sample B Male 153.7
Sample C Female 161.1
Sample D Female 148.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
70303612 Antisense, RP_050609_01_H12, Mouse strain C57BL/6J (56 days, male) 4.9

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