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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.2
nTPM
Monaco:
26.4
nTPM
Schmiedel:
27.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.2
HPA sample
nTPM
gdT-cell nTPM: 9.9
Samples: 6
Max nTPM: 14.9
Min nTPM: 3.9
P10809_1007
11.1
P10809_1022
14.9
P10809_1041
8.5
P10809_1060
3.9
P10809_1077
8.2
P10809_1098
12.9
MAIT T-cell nTPM: 9.5
Samples: 6
Max nTPM: 12.8
Min nTPM: 6.6
P10809_1006
9.8
P10809_1024
6.6
P10809_1043
12.8
P10809_1062
7.8
P10809_1083
10.2
P10809_1097
9.7
Memory CD4 T-cell nTPM: 15.1
Samples: 6
Max nTPM: 33.0
Min nTPM: 9.4
P10809_1014
15.7
P10809_1026
33.0
P10809_1045
12.3
P10809_1064
10.4
P10809_1086
10.0
P10809_1113
9.4
Memory CD8 T-cell nTPM: 11.4
Samples: 5
Max nTPM: 16.4
Min nTPM: 5.1
P10809_1012
9.0
P10809_1027
16.4
P10809_1046
15.6
P10809_1065
11.1
P10809_1111
5.1
Naive CD4 T-cell nTPM: 16.6
Samples: 6
Max nTPM: 23.2
Min nTPM: 7.3
P10809_1015
13.2
P10809_1030
20.7
P10809_1049
23.2
P10809_1068
11.8
P10809_1085
23.2
P10809_1112
7.3
Naive CD8 T-cell nTPM: 10.8
Samples: 6
Max nTPM: 20.4
Min nTPM: 5.0
P10809_1016
14.3
P10809_1031
20.4
P10809_1050
13.6
P10809_1069
6.2
P10809_1087
5.5
P10809_1110
5.0
T-reg nTPM: 19.2
Samples: 6
Max nTPM: 27.6
Min nTPM: 14.0
P10809_1018
15.4
P10809_1037
27.6
P10809_1056
16.0
P10809_1075
26.5
P10809_1094
15.6
P10809_1106
14.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 8.3
Samples: 4
Max nTPM: 14.5
Min nTPM: 2.2
RHH5202_R3573
9.5
RHH5230_R3602
2.2
RHH5259_R3631
14.5
RHH5288_R3660
6.8
Effector memory CD8 T-cell nTPM: 13.0
Samples: 4
Max nTPM: 16.6
Min nTPM: 6.5
RHH5203_R3574
15.0
RHH5231_R3603
16.6
RHH5260_R3632
14.0
RHH5289_R3661
6.5
MAIT T-cell nTPM: 8.6
Samples: 4
Max nTPM: 11.9
Min nTPM: 3.7
RHH5233_R3605
11.8
RHH5205_R3576
3.7
RHH5262_R3634
6.9
RHH5297_R3663
11.9
Memory CD4 T-cell TFH nTPM: 17.7
Samples: 4
Max nTPM: 27.5
Min nTPM: 12.7
RHH5300_R3666
16.5
RHH5236_R3608
27.5
RHH5265_R3637
13.9
RHH5208_R3579
12.7
Memory CD4 T-cell Th1 nTPM: 14.9
Samples: 4
Max nTPM: 17.0
Min nTPM: 12.8
RHH5210_R3581
17.0
RHH5302_R3668
14.1
RHH5238_R3610
12.8
RHH5267_R3639
15.8
Memory CD4 T-cell Th1/Th17 nTPM: 12.5
Samples: 4
Max nTPM: 19.7
Min nTPM: 4.9
RHH5303_R3669
4.9
RHH5211_R3582
17.4
RHH5239_R3611
19.7
RHH5268_R3640
7.8
Memory CD4 T-cell Th17 nTPM: 8.9
Samples: 4
Max nTPM: 12.2
Min nTPM: 5.9
RHH5304_R3670
5.9
RHH5212_R3583
12.2
RHH5240_R3612
9.5
RHH5269_R3641
7.8
Memory CD4 T-cell Th2 nTPM: 15.1
Samples: 4
Max nTPM: 19.9
Min nTPM: 10.9
RHH5305_R3671
10.9
RHH5213_R3584
19.9
RHH5241_R3613
17.2
RHH5270_R3642
12.4
Naive CD4 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 27.5
Min nTPM: 7.7
RHH5306_R3672
13.1
RHH5214_R3585
27.5
RHH5242_R3614
7.7
RHH5271_R3643
18.2
Naive CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 20.3
Min nTPM: 7.0
RHH5201_R3572
7.6
RHH5229_R3601
20.3
RHH5258_R3630
15.9
RHH5287_R3659
7.0
Non-Vd2 gdTCR nTPM: 10.9
Samples: 4
Max nTPM: 13.9
Min nTPM: 6.9
RHH5235_R3607
13.9
RHH5264_R3636
9.9
RHH5207_R3578
6.9
RHH5299_R3665
12.9
T-reg nTPM: 26.4
Samples: 4
Max nTPM: 51.4
Min nTPM: 12.6
RHH5301_R3667
23.5
RHH5237_R3609
51.4
RHH5266_R3638
12.6
RHH5209_R3580
18.1
Terminal effector memory CD4 T-cell nTPM: 9.0
Samples: 2
Max nTPM: 14.3
Min nTPM: 3.7
RHH5243_R3615
3.7
RHH5272_R3644
14.3
Terminal effector memory CD8 T-cell nTPM: 11.1
Samples: 4
Max nTPM: 13.5
Min nTPM: 9.4
RHH5232_R3604
9.9
RHH5204_R3575
13.5
RHH5261_R3633
11.7
RHH5296_R3662
9.4
Vd2 gdTCR nTPM: 9.3
Samples: 4
Max nTPM: 16.7
Min nTPM: 5.2
RHH5234_R3606
7.5
RHH5206_R3577
16.7
RHH5263_R3635
5.2
RHH5298_R3664
7.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
