HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		135.143
RNA expressioni
Consensus:46.4 nTPM
HPA Brain:184.0 nTPM
GTEx:46.4 nTPM
FANTOM5:166.6 Scaled Tags Per Million
Pig:192.7 nTPM
Mouse:216.2 nTPM
Allen mouse:18.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069176
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079008
Hippocampal formation mean intensity 135.143
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 104.919
Molecular layer of the dentate gyrus 111.578
Granular dentate gyrus 85.416
CA1 - oriens layer 109.306
CA1 - pyramidal layer 85.017
CA1 - radiatum layer 108.161
CA2 - oriens layer 117.323
CA2 - pyramidal layer 93.658
CA2 - radiatum layer 115.985
CA3 - oriens layer 114.414
CA3 - pyramidal layer 81.436
CA3 - radiatum layer 111.995
Stratum lucidum 95.666
Lacunosum moleculare 98.675
Subiculum 80.021

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.0
Sample id Sample description nTPM
Hippocampus
nTPM: 130.6
2621 Female, age 67, right hemisphere 167.2
2148 Female, age 91, left hemisphere 151.8
1898 Male, age 80, left hemisphere 143.1
1855 Male, age 76, left hemisphere 121.5
1911 Female, age 85, right hemisphere 101.1
2529 Female, age 94, left hemisphere 99.2
Dentate gyrus
nTPM: 139.9
1927 Female, age 91, both hemispheres 185.6
2531 Female, age 67, both hemispheres 157.0
2530 Female, age 94, left hemisphere 142.5
2010 Male, age 76, both hemispheres 125.2
2246 Female, age 85, both hemispheres 119.2
2528 Male, age 74, both hemispheres 110.1
Entorhinal gyrus
nTPM: 159.2
2613 Female, age 94, left hemisphere 229.7
2764 Male, age 80, right hemisphere 174.5
2686 Male, age 75, right hemisphere 172.6
1938 Female, age 85, left hemisphere 148.9
1787 Male, age 76, left hemisphere 143.2
2117 Female, age 91, right hemisphere 86.1
Hippocampus, CA1
nTPM: 145.0
2749 Male, age 80, left hemisphere 206.4
2045 Male, age 76, both hemispheres 164.4
1873 Female, age 85, both hemispheres 129.6
2527 Male, age 74, both hemispheres 123.6
2082 Female, age 91, right hemisphere 100.8
Hippocampus, CA2
nTPM: 137.9
1892 Male, age 76, both hemispheres 198.0
2437 Female, age 94, left hemisphere 157.4
1963 Male, age 80, left hemisphere 150.5
1940 Female, age 85, left hemisphere 126.7
2113 Female, age 91, right hemisphere 105.2
2249 Male, age 74, both hemispheres 89.6
Hippocampus, CA3
nTPM: 152.0
2620 Female, age 94, left hemisphere 198.3
2137 Male, age 80, left hemisphere 183.2
2861 Female, age 67, both hemispheres 182.4
1867 Male, age 76, both hemispheres 158.2
1891 Female, age 85, both hemispheres 102.7
2436 Male, age 74, both hemispheres 87.3
Parahippocampal cortex
nTPM: 159.8
2245 Female, age 91, both hemispheres 203.5
2622 Female, age 67, right hemisphere 196.6
2693 Female, age 94, both hemispheres 180.4
1850 Male, age 80, both hemispheres 171.5
2532 Female, age 72, left hemisphere 162.0
1990 Female, age 91, right hemisphere 161.7
2250 Female, age 67, right hemisphere 143.0
1933 Female, age 85, both hemispheres 130.6
2692 Male, age 74, both hemispheres 130.0
2018 Male, age 76, both hemispheres 118.2
Perirhinal gyrus
nTPM: 184.0
2521 Female, age 94, right hemisphere 215.3
1847 Female, age 91, left hemisphere 199.4
1794 Male, age 80, right hemisphere 184.2
1841 Female, age 85, right hemisphere 166.2
2848 Male, age 76, right hemisphere 154.8
Subiculum
nTPM: 119.5
2438 Female, age 94, left hemisphere 152.1
1977 Female, age 85, both hemispheres 131.2
2619 Male, age 74, both hemispheres 130.7
1901 Male, age 80, both hemispheres 127.8
2042 Male, age 76, both hemispheres 90.6
2729 Female, age 91, right hemisphere 84.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.4
Samples: 197

Max nTPM: 117.8
Min nTPM: 2.7
Std nTPM: 25.3
Median nTPM: 44.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 117.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 110.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 105.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 105.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 101.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 97.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 94.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 93.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 91.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 166.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 166.6
FF:10169-103B7 60 years, female 181.7
FF:10153-102I9 76 years, female 151.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 192.7
Pig sample Sample description nTPM
Subiculum
nTPM: 135.6
Samples: 4

Max nTPM: 189.4
Min nTPM: 107.3
Sample A Female 189.4
Sample B Female 117.7
Sample C Male 128.1
Sample D Male 107.3
Dorsal hippocampus
nTPM: 127.4
Samples: 4

Max nTPM: 138.7
Min nTPM: 117.8
Sample A Female 138.7
Sample B Female 132.9
Sample C Male 117.8
Sample D Male 120.3
Entorhinal cortex
nTPM: 192.7
Samples: 4

Max nTPM: 224.3
Min nTPM: 179.7
Sample A Female 224.3
Sample B Female 180.0
Sample C Male 179.7
Sample D Male 186.8
Ventral hippocampus
nTPM: 127.2
Samples: 4

Max nTPM: 162.1
Min nTPM: 90.4
Sample A Female 115.8
Sample B Female 90.4
Sample C Male 162.1
Sample D Male 140.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 216.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 216.3
Samples: 4

Max nTPM: 233.7
Min nTPM: 204.1
Sample A Male 217.9
Sample B Male 209.3
Sample C Female 204.1
Sample D Female 233.7
Hippocampal formation
nTPM: 183.5
Samples: 4

Max nTPM: 192.6
Min nTPM: 176.3
Sample A Male 186.2
Sample B Male 178.9
Sample C Female 192.6
Sample D Female 176.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.2
100144175 Antisense, RP_110407_03_C11, Mouse strain C57BL/6J (56 days, male) 18.2

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