HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:236.1 nTPM
HPA Brain:179.5 nTPM
GTEx:236.1 nTPM
FANTOM5:314.6 Scaled Tags Per Million
Pig:144.6 nTPM
Mouse:87.0 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 179.5
Sample id Sample description nTPM
Hippocampus
nTPM: 160.6
1898 Male, age 80, left hemisphere 180.0
1911 Female, age 85, right hemisphere 171.6
2148 Female, age 91, left hemisphere 165.9
2529 Female, age 94, left hemisphere 151.5
2621 Female, age 67, right hemisphere 148.9
1855 Male, age 76, left hemisphere 145.7
Dentate gyrus
nTPM: 159.9
2530 Female, age 94, left hemisphere 188.7
2528 Male, age 74, both hemispheres 159.5
1927 Female, age 91, both hemispheres 155.8
2531 Female, age 67, both hemispheres 154.8
2010 Male, age 76, both hemispheres 154.5
2246 Female, age 85, both hemispheres 146.2
Entorhinal gyrus
nTPM: 179.5
2764 Male, age 80, right hemisphere 204.2
2686 Male, age 75, right hemisphere 198.7
1938 Female, age 85, left hemisphere 187.1
2117 Female, age 91, right hemisphere 170.3
2613 Female, age 94, left hemisphere 162.0
1787 Male, age 76, left hemisphere 154.6
Hippocampus, CA1
nTPM: 176.8
1873 Female, age 85, both hemispheres 186.0
2749 Male, age 80, left hemisphere 185.0
2045 Male, age 76, both hemispheres 184.7
2082 Female, age 91, right hemisphere 167.8
2527 Male, age 74, both hemispheres 160.3
Hippocampus, CA2
nTPM: 171.4
1963 Male, age 80, left hemisphere 189.9
1892 Male, age 76, both hemispheres 183.0
2113 Female, age 91, right hemisphere 171.8
2249 Male, age 74, both hemispheres 169.3
2437 Female, age 94, left hemisphere 165.2
1940 Female, age 85, left hemisphere 149.3
Hippocampus, CA3
nTPM: 163.2
1867 Male, age 76, both hemispheres 192.8
2137 Male, age 80, left hemisphere 174.7
1891 Female, age 85, both hemispheres 169.7
2861 Female, age 67, both hemispheres 153.0
2436 Male, age 74, both hemispheres 146.9
2620 Female, age 94, left hemisphere 142.1
Parahippocampal cortex
nTPM: 169.3
1850 Male, age 80, both hemispheres 190.1
2692 Male, age 74, both hemispheres 183.2
1933 Female, age 85, both hemispheres 177.4
2245 Female, age 91, both hemispheres 172.0
1990 Female, age 91, right hemisphere 165.4
2250 Female, age 67, right hemisphere 165.3
2622 Female, age 67, right hemisphere 165.3
2018 Male, age 76, both hemispheres 164.3
2693 Female, age 94, both hemispheres 160.4
2532 Female, age 72, left hemisphere 149.3
Perirhinal gyrus
nTPM: 176.9
1794 Male, age 80, right hemisphere 208.5
1841 Female, age 85, right hemisphere 191.7
1847 Female, age 91, left hemisphere 176.0
2848 Male, age 76, right hemisphere 161.6
2521 Female, age 94, right hemisphere 146.7
Subiculum
nTPM: 165.6
1977 Female, age 85, both hemispheres 178.9
1901 Male, age 80, both hemispheres 177.0
2042 Male, age 76, both hemispheres 163.6
2619 Male, age 74, both hemispheres 162.6
2729 Female, age 91, right hemisphere 156.9
2438 Female, age 94, left hemisphere 154.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 236.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 236.1
Samples: 197

Max nTPM: 536.3
Min nTPM: 40.7
Std nTPM: 75.5
Median nTPM: 232.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 536.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 442.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 429.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 422.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 418.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 401.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 380.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 380.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 378.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 374.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 372.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 314.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 314.6
FF:10169-103B7 60 years, female 407.1
FF:10153-102I9 76 years, female 222.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.6
Pig sample Sample description nTPM
Subiculum
nTPM: 140.4
Samples: 4

Max nTPM: 161.2
Min nTPM: 116.7
Sample A Female 139.7
Sample B Female 161.2
Sample C Male 143.9
Sample D Male 116.7
Dorsal hippocampus
nTPM: 139.0
Samples: 4

Max nTPM: 161.6
Min nTPM: 120.9
Sample A Female 133.2
Sample B Female 140.3
Sample C Male 161.6
Sample D Male 120.9
Entorhinal cortex
nTPM: 109.2
Samples: 4

Max nTPM: 131.4
Min nTPM: 93.2
Sample A Female 105.2
Sample B Female 131.4
Sample C Male 106.9
Sample D Male 93.2
Ventral hippocampus
nTPM: 144.6
Samples: 4

Max nTPM: 173.8
Min nTPM: 127.3
Sample A Female 127.3
Sample B Female 149.9
Sample C Male 173.8
Sample D Male 127.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.0
Samples: 4

Max nTPM: 97.3
Min nTPM: 74.8
Sample A Male 97.3
Sample B Male 92.9
Sample C Female 74.8
Sample D Female 83.0
Hippocampal formation
nTPM: 74.2
Samples: 4

Max nTPM: 99.4
Min nTPM: 58.4
Sample A Male 99.4
Sample B Male 73.6
Sample C Female 58.4
Sample D Female 65.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
69548958 Antisense, RP_050426_02_F05, Mouse strain C57BL/6J (56 days, male) 3.6

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