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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
372.0
nTPM
GTEx:
372.0
nTPM
FANTOM5:
768.9
Scaled Tags Per Million
Pig:
174.2
nTPM
Mouse:
329.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
372.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 372.0
Samples: 105
Max nTPM: 681.8
Min nTPM: 102.5
Std nTPM: 120.1
Median nTPM: 0.0
377_1
82 years, female
681.8
163_1
78 years, male
624.6
320_1
89 years, female
599.5
376_1
75 years, female
595.5
322_1
76 years, male
572.1
251_1
78 years, male
554.4
319_1
81 years, male
550.3
321_1
62 years, female
549.7
293_1
68 years, female
548.2
292_1
71 years, male
531.8
406_1
79 years, male
519.7
153_1
70 years, female
517.1
316_1
62 years, male
515.3
425_1
59 years, female
513.2
394_1
75 years, female
511.8
246_1
77 years, male
509.8
503_1
68 years, male
507.3
517_1
88 years, male
507.3
189_1
76 years, male
499.1
2_1
77 years, female
476.2
405_1
91 years, male
472.2
353_1
82 years, female
466.6
264_1
73 years, female
466.4
335_1
73 years, female
463.7
518_1
75 years, female
462.3
291_1
76 years, male
452.1
254_1
77 years, female
447.7
495_1
57 years, female
447.1
229_1
69 years, female
445.8
318_1
68 years, male
439.6
384_1
83 years, male
439.3
389_1
86 years, female
435.9
217_1
76 years, male
432.8
295_1
61 years, female
429.4
265_1
87 years, male
426.5
126_1
63 years, male
423.5
286_1
68 years, female
423.2
452_1
88 years, female
421.8
348_1
84 years, male
421.6
404_1
82 years, female
414.9
288_1
66 years, female
414.0
468_1
89 years, male
413.1
466_1
57 years, female
411.1
526_1
61 years, male
410.3
18_1
88 years, male
409.5
480_1
63 years, male
406.6
352_1
62 years, male
384.7
414_1
84 years, female
384.5
499_1
55 years, female
383.4
81_1
67 years, male
378.2
17_1
71 years, male
377.7
237_1
82 years, male
376.3
177_1
74 years, male
374.8
413_1
59 years, female
369.7
349_1
83 years, male
366.5
6_1
73 years, female
365.0
137_1
83 years, male
363.6
4_1
88 years, female
362.3
172_1
72 years, female
360.0
350_1
84 years, female
359.6
311_1
78 years, male
353.5
354_1
81 years, female
351.4
501_1
88 years, male
336.1
351_1
91 years, male
334.5
386_1
76 years, male
332.5
115_1
83 years, male
330.1
145_1
84 years, male
327.0
35_1
74 years, female
321.9
218_1
71 years, female
319.4
139_1
64 years, female
315.6
379_1
60 years, male
307.8
266_1
85 years, male
306.4
307_1
66 years, female
306.2
396_1
62 years, male
303.4
324_1
76 years, male
302.1
314_1
67 years, male
300.7
243_1
75 years, male
299.0
9_1
66 years, female
294.7
415_1
77 years, female
283.1
356_1
87 years, female
279.9
43_1
64 years, female
279.6
355_1
70 years, female
272.6
506_1
65 years, male
269.5
149_1
88 years, male
269.4
308_1
70 years, female
265.5
375_1
74 years, female
264.6
173_1
67 years, male
261.2
313_1
79 years, female
260.3
32_1
67 years, male
249.6
315_1
62 years, female
248.6
447_1
81 years, male
244.0
162_1
79 years, female
241.4
109_1
81 years, female
231.5
317_1
60 years, male
228.8
120_1
70 years, female
216.1
142_1
61 years, female
198.6
117_1
61 years, male
195.1
41_1
94 years, female
188.2
89_1
63 years, male
169.5
42_1
85 years, male
166.8
491_1
89 years, female
152.9
347_1
72 years, male
137.2
490_1
67 years, female
134.2
119_1
70 years, female
117.8
99_1
64 years, male
102.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.