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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
185.9
nTPM
FANTOM5:
418.2
Scaled Tags Per Million
Pig:
155.1
nTPM
Allen mouse:
1.7
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
185.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 171.1
2301
Female, age 85, both hemispheres
182.6
2188
Female, age 91, both hemispheres
174.7
2090
Male, age 80, both hemispheres
173.9
1984
Male, age 76, both hemispheres
153.4
Dorsal cochlear nucleus nTPM: 170.4
2187
Female, age 91, both hemispheres
179.2
2802
Male, age 74, right hemisphere
176.5
2058
Male, age 76, both hemispheres
169.9
2370
Male, age 61, both hemispheres
167.6
2378
Male, age 80, both hemispheres
158.7
Dorsal tegmental nucleus nTPM: 171.7
2326
Male, age 74, both hemispheres
186.2
1936
Male, age 76, left hemisphere
169.3
2083
Male, age 80, both hemispheres
168.9
2358
Male, age 61, both hemispheres
162.5
Dorsolateral tegmental area nTPM: 178.4
2141
Male, age 76, both hemispheres
192.9
2360
Male, age 74, both hemispheres
190.0
2751
Female, age 85, both hemispheres
177.9
2337
Male, age 61, both hemispheres
168.0
2654
Male, age 80, both hemispheres
163.3
Kolliker-Fuse nucleus nTPM: 154.6
2793
Female, age 91, left hemisphere
161.6
2163
Male, age 80, both hemispheres
155.7
2315
Male, age 76, right hemisphere
146.4
Lateral lemniscal nuclei nTPM: 165.9
2746
Female, age 85, left hemisphere
174.4
2453
Male, age 74, right hemisphere
171.1
2320
Female, age 91, left hemisphere
165.5
2036
Male, age 80, both hemispheres
159.3
2169
Male, age 76, both hemispheres
159.1
Lateral parabrachial nucleus nTPM: 166.2
2139
Female, age 85, right hemisphere
170.2
2790
Male, age 61, both hemispheres
167.1
2013
Male, age 80, both hemispheres
166.9
2792
Male, age 76, both hemispheres
160.5
Lateral vestibular nucleus nTPM: 162.0
2311
Male, age 80, both hemispheres
168.6
2184
Male, age 76, both hemispheres
155.3
Locus coeruleus nTPM: 169.3
2014
Male, age 55, unknown
186.8
2162
Male, age 80, both hemispheres
186.5
2317
Female, age 72, unknown
170.7
2123
Female, age 91, both hemispheres
169.6
2720
Male, age 74, both hemispheres
158.3
1980
Male, age 76, both hemispheres
157.5
2788
Male, age 74, unknown
155.9
Medial parabrachial nucleus nTPM: 162.5
2170
Female, age 91, both hemispheres
182.1
2786
Male, age 76, both hemispheres
165.9
2463
Female, age 85, right hemisphere
156.7
2156
Male, age 61, both hemispheres
155.7
2854
Male, age 80, both hemispheres
151.9
Medial periolivary nuclei nTPM: 166.5
2063
Male, age 76, both hemispheres
177.6
2081
Male, age 80, both hemispheres
172.6
2791
Male, age 74, right hemisphere
169.9
2458
Female, age 91, both hemispheres
162.1
2171
Female, age 85, both hemispheres
150.1
Motor facial nucleus nTPM: 173.3
2126
Male, age 61, both hemispheres
188.3
2062
Male, age 76, both hemispheres
182.0
2697
Female, age 85, both hemispheres
170.7
2795
Female, age 91, both hemispheres
170.2
2327
Male, age 80, both hemispheres
164.4
2365
Male, age 74, right hemisphere
164.1
Motor trigeminal nucleus nTPM: 167.5
2321
Female, age 91, both hemispheres
190.3
2560
Male, age 74, both hemispheres
166.9
2309
Male, age 76, both hemispheres
166.1
2079
Male, age 80, both hemispheres
159.1
2335
Male, age 61, both hemispheres
155.2
Nuclei of the trapezoid body nTPM: 176.4
1983
Male, age 76, both hemispheres
203.4
2159
Male, age 61, both hemispheres
188.9
2368
Female, age 91, both hemispheres
167.3
2166
Male, age 80, both hemispheres
166.1
2735
Female, age 85, both hemispheres
156.5
Nucleus raphe magnus nTPM: 162.3
2160
Male, age 61, both hemispheres
200.1
2455
Male, age 74, both hemispheres
165.1
2051
Male, age 76, both hemispheres
160.5
2328
Male, age 80, both hemispheres
154.7
2172
Female, age 85, both hemispheres
148.8
2459
Female, age 91, both hemispheres
144.3
Paramedian reticular nucleus nTPM: 161.3
2313
Male, age 61, both hemispheres
182.6
2057
Male, age 80, both hemispheres
162.4
2050
Female, age 85, both hemispheres
160.8
2052
Male, age 76, both hemispheres
139.6
Pedunculopontine tegmental nucleus nTPM: 172.4
1921
Female, age 85, both hemispheres
185.3
2334
Male, age 80, both hemispheres
167.5
2338
Male, age 61, both hemispheres
164.4
Pontine nuclei nTPM: 178.6
2727
Male, age 61, right hemisphere
216.6
2319
Female, age 91, both hemispheres
197.1
2115
Male, age 80, left hemisphere
181.9
2454
Male, age 74, left hemisphere
180.9
1968
Male, age 76, left hemisphere
179.3
1863
Male, age 55, unknown
169.3
2787
Female, age 85, both hemispheres
154.6
2109
Female, age 72, unknown
149.4
Pontine raphe nucleus nTPM: 185.9
2853
Male, age 76, midline
195.5
2122
Female, age 85, midline
176.3
Posteroventral cochlear nucleus nTPM: 174.7
2135
Female, age 91, both hemispheres
207.6
2070
Male, age 76, both hemispheres
177.0
2752
Female, age 85, both hemispheres
172.0
2371
Male, age 61, both hemispheres
164.6
2341
Male, age 80, both hemispheres
152.3
Principal sensory trigeminal nucleus nTPM: 171.7
2158
Male, age 61, both hemispheres
198.2
2367
Female, age 91, left hemisphere
174.3
2008
Male, age 80, left hemisphere
158.5
2324
Male, age 76, both hemispheres
156.0
Reticular pontine nucleus, caudal nTPM: 177.4
2559
Male, age 74, both hemispheres
190.8
2457
Female, age 91, both hemispheres
175.0
2092
Male, age 76, both hemispheres
173.5
2332
Male, age 80, right hemisphere
170.3
Reticular pontine nucleus, oral nTPM: 170.7
2366
Female, age 91, both hemispheres
188.3
2167
Male, age 76, both hemispheres
169.8
1939
Male, age 80, both hemispheres
166.6
2012
Female, age 85, both hemispheres
165.6
2361
Male, age 74, both hemispheres
163.0
Reticulotegmental nucleus nTPM: 171.8
2452
Male, age 74, both hemispheres
186.5
2325
Male, age 76, both hemispheres
171.7
2322
Female, age 91, both hemispheres
167.5
2333
Male, age 80, both hemispheres
161.6
Spinal trigeminal nucleus, oral nTPM: 170.9
1978
Male, age 76, both hemispheres
182.3
2737
Female, age 85, both hemispheres
166.0
2164
Male, age 80, both hemispheres
164.5
Subcoeruleus area nTPM: 176.9
2451
Male, age 74, both hemispheres
192.8
2369
Female, age 85, left hemisphere
186.6
2323
Female, age 91, left hemisphere
179.3
2089
Male, age 76, left hemisphere
168.9
1958
Male, age 80, both hemispheres
156.8
Superior olive nTPM: 169.1
2364
Male, age 74, right hemisphere
177.3
2020
Male, age 76, both hemispheres
175.0
2561
Female, age 91, both hemispheres
168.0
2329
Male, age 80, right hemisphere
165.5
1875
Female, age 85, both hemispheres
159.8
Ventral periolivary nuclei nTPM: 170.7
2794
Female, age 91, left hemisphere
185.7
2023
Male, age 76, both hemispheres
184.2
2165
Male, age 80, both hemispheres
171.2
2130
Female, age 85, both hemispheres
141.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 160.0
2456
Female, age 91, both hemispheres
164.6
2359
Male, age 61, both hemispheres
164.1
1959
Male, age 76, both hemispheres
160.1
2449
Male, age 74, both hemispheres
158.9
2161
Male, age 80, both hemispheres
158.2
2840
Female, age 85, both hemispheres
154.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
155.1
Pig sample
Sample description
nTPM
Pons nTPM: 155.2
Samples: 4
Max nTPM: 172.8
Min nTPM: 133.3
Sample A
Female
133.3
Sample B
Female
172.8
Sample C
Male
158.7
Sample D
Male
155.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
