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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
245.4
nTPM
Monaco:
533.3
nTPM
Schmiedel:
290.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
245.4
HPA sample
nTPM
gdT-cell nTPM: 212.9
Samples: 6
Max nTPM: 270.1
Min nTPM: 159.8
P10809_1007
238.2
P10809_1022
270.1
P10809_1041
239.7
P10809_1060
207.7
P10809_1077
161.8
P10809_1098
159.8
MAIT T-cell nTPM: 218.2
Samples: 6
Max nTPM: 279.7
Min nTPM: 178.2
P10809_1006
244.6
P10809_1024
279.7
P10809_1043
192.6
P10809_1062
209.8
P10809_1083
178.2
P10809_1097
204.1
Memory CD4 T-cell nTPM: 190.6
Samples: 6
Max nTPM: 240.8
Min nTPM: 151.5
P10809_1014
204.1
P10809_1026
240.8
P10809_1045
204.9
P10809_1064
181.2
P10809_1086
151.5
P10809_1113
161.1
Memory CD8 T-cell nTPM: 193.5
Samples: 5
Max nTPM: 250.9
Min nTPM: 148.9
P10809_1012
212.9
P10809_1027
250.9
P10809_1046
199.6
P10809_1065
148.9
P10809_1111
155.4
Naive CD4 T-cell nTPM: 213.9
Samples: 6
Max nTPM: 244.2
Min nTPM: 187.9
P10809_1015
229.8
P10809_1030
244.2
P10809_1049
204.4
P10809_1068
221.8
P10809_1085
187.9
P10809_1112
195.2
Naive CD8 T-cell nTPM: 205.7
Samples: 6
Max nTPM: 245.3
Min nTPM: 157.9
P10809_1016
245.3
P10809_1031
245.0
P10809_1050
186.0
P10809_1069
205.6
P10809_1087
157.9
P10809_1110
194.2
T-reg nTPM: 245.4
Samples: 6
Max nTPM: 317.7
Min nTPM: 212.3
P10809_1018
252.4
P10809_1037
231.6
P10809_1056
224.0
P10809_1075
234.3
P10809_1094
317.7
P10809_1106
212.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
533.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 449.3
Samples: 4
Max nTPM: 554.6
Min nTPM: 268.2
RHH5202_R3573
554.6
RHH5230_R3602
524.1
RHH5259_R3631
268.2
RHH5288_R3660
450.4
Effector memory CD8 T-cell nTPM: 390.6
Samples: 4
Max nTPM: 459.7
Min nTPM: 289.9
RHH5203_R3574
394.0
RHH5231_R3603
459.7
RHH5260_R3632
289.9
RHH5289_R3661
418.8
MAIT T-cell nTPM: 469.8
Samples: 4
Max nTPM: 650.5
Min nTPM: 366.6
RHH5233_R3605
650.5
RHH5205_R3576
381.8
RHH5262_R3634
366.6
RHH5297_R3663
480.3
Memory CD4 T-cell TFH nTPM: 502.2
Samples: 4
Max nTPM: 676.8
Min nTPM: 384.8
RHH5300_R3666
406.9
RHH5236_R3608
676.8
RHH5265_R3637
384.8
RHH5208_R3579
540.4
Memory CD4 T-cell Th1 nTPM: 437.4
Samples: 4
Max nTPM: 530.3
Min nTPM: 255.4
RHH5210_R3581
530.3
RHH5302_R3668
530.1
RHH5238_R3610
433.9
RHH5267_R3639
255.4
Memory CD4 T-cell Th1/Th17 nTPM: 460.5
Samples: 4
Max nTPM: 630.7
Min nTPM: 307.4
RHH5303_R3669
590.2
RHH5211_R3582
630.7
RHH5239_R3611
313.7
RHH5268_R3640
307.4
Memory CD4 T-cell Th17 nTPM: 404.4
Samples: 4
Max nTPM: 538.0
Min nTPM: 272.9
RHH5304_R3670
379.0
RHH5212_R3583
538.0
RHH5240_R3612
427.6
RHH5269_R3641
272.9
Memory CD4 T-cell Th2 nTPM: 495.1
Samples: 4
Max nTPM: 666.0
Min nTPM: 325.5
RHH5305_R3671
463.5
RHH5213_R3584
525.3
RHH5241_R3613
666.0
RHH5270_R3642
325.5
Naive CD4 T-cell nTPM: 528.6
Samples: 4
Max nTPM: 611.6
Min nTPM: 396.3
RHH5306_R3672
551.7
RHH5214_R3585
554.9
RHH5242_R3614
611.6
RHH5271_R3643
396.3
Naive CD8 T-cell nTPM: 513.2
Samples: 4
Max nTPM: 606.3
Min nTPM: 380.7
RHH5201_R3572
606.3
RHH5229_R3601
380.7
RHH5258_R3630
500.4
RHH5287_R3659
565.4
Non-Vd2 gdTCR nTPM: 437.0
Samples: 4
Max nTPM: 482.6
Min nTPM: 364.8
RHH5235_R3607
364.8
RHH5264_R3636
446.1
RHH5207_R3578
482.6
RHH5299_R3665
454.6
T-reg nTPM: 474.8
Samples: 4
Max nTPM: 562.5
Min nTPM: 315.5
RHH5301_R3667
484.5
RHH5237_R3609
562.5
RHH5266_R3638
315.5
RHH5209_R3580
536.6
Terminal effector memory CD4 T-cell nTPM: 394.9
Samples: 2
Max nTPM: 418.1
Min nTPM: 371.6
RHH5243_R3615
371.6
RHH5272_R3644
418.1
Terminal effector memory CD8 T-cell nTPM: 438.9
Samples: 4
Max nTPM: 534.8
Min nTPM: 242.4
RHH5232_R3604
534.8
RHH5204_R3575
486.9
RHH5261_R3633
242.4
RHH5296_R3662
491.3
Vd2 gdTCR nTPM: 533.3
Samples: 4
Max nTPM: 655.0
Min nTPM: 375.5
RHH5234_R3606
655.0
RHH5206_R3577
618.6
RHH5263_R3635
375.5
RHH5298_R3664
483.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.