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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
434.2
nTPM
Monaco:
50.9
nTPM
Schmiedel:
120.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
434.2
HPA sample
nTPM
gdT-cell nTPM: 434.2
Samples: 6
Max nTPM: 512.2
Min nTPM: 345.5
P10809_1007
356.7
P10809_1022
476.0
P10809_1041
512.2
P10809_1060
345.5
P10809_1077
492.3
P10809_1098
422.4
MAIT T-cell nTPM: 404.8
Samples: 6
Max nTPM: 510.6
Min nTPM: 205.2
P10809_1006
205.2
P10809_1024
344.7
P10809_1043
477.0
P10809_1062
469.0
P10809_1083
422.5
P10809_1097
510.6
Memory CD4 T-cell nTPM: 292.4
Samples: 6
Max nTPM: 329.0
Min nTPM: 186.4
P10809_1014
186.4
P10809_1026
321.9
P10809_1045
282.1
P10809_1064
315.6
P10809_1086
319.3
P10809_1113
329.0
Memory CD8 T-cell nTPM: 369.1
Samples: 5
Max nTPM: 466.1
Min nTPM: 226.5
P10809_1012
226.5
P10809_1027
466.1
P10809_1046
390.2
P10809_1065
401.0
P10809_1111
361.5
Naive CD4 T-cell nTPM: 242.1
Samples: 6
Max nTPM: 315.5
Min nTPM: 139.7
P10809_1015
139.7
P10809_1030
264.9
P10809_1049
315.5
P10809_1068
222.0
P10809_1085
252.3
P10809_1112
258.2
Naive CD8 T-cell nTPM: 316.6
Samples: 6
Max nTPM: 418.8
Min nTPM: 183.4
P10809_1016
183.4
P10809_1031
345.0
P10809_1050
282.9
P10809_1069
416.6
P10809_1087
418.8
P10809_1110
252.7
T-reg nTPM: 374.5
Samples: 6
Max nTPM: 592.4
Min nTPM: 235.9
P10809_1018
235.9
P10809_1037
295.8
P10809_1056
592.4
P10809_1075
360.6
P10809_1094
453.3
P10809_1106
308.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 44.8
Min nTPM: 14.6
RHH5202_R3573
14.6
RHH5230_R3602
21.8
RHH5259_R3631
44.8
RHH5288_R3660
23.5
Effector memory CD8 T-cell nTPM: 28.6
Samples: 4
Max nTPM: 43.5
Min nTPM: 20.9
RHH5203_R3574
23.6
RHH5231_R3603
26.2
RHH5260_R3632
43.5
RHH5289_R3661
20.9
MAIT T-cell nTPM: 36.9
Samples: 4
Max nTPM: 45.8
Min nTPM: 24.3
RHH5233_R3605
24.3
RHH5205_R3576
45.8
RHH5262_R3634
43.7
RHH5297_R3663
33.6
Memory CD4 T-cell TFH nTPM: 22.3
Samples: 4
Max nTPM: 27.0
Min nTPM: 16.8
RHH5300_R3666
16.8
RHH5236_R3608
27.0
RHH5265_R3637
25.9
RHH5208_R3579
19.5
Memory CD4 T-cell Th1 nTPM: 35.1
Samples: 4
Max nTPM: 45.2
Min nTPM: 15.9
RHH5210_R3581
15.9
RHH5302_R3668
45.2
RHH5238_R3610
44.6
RHH5267_R3639
34.5
Memory CD4 T-cell Th1/Th17 nTPM: 28.7
Samples: 4
Max nTPM: 36.8
Min nTPM: 19.7
RHH5303_R3669
19.7
RHH5211_R3582
23.8
RHH5239_R3611
34.6
RHH5268_R3640
36.8
Memory CD4 T-cell Th17 nTPM: 30.6
Samples: 4
Max nTPM: 34.9
Min nTPM: 25.9
RHH5304_R3670
34.9
RHH5212_R3583
25.9
RHH5240_R3612
29.2
RHH5269_R3641
32.3
Memory CD4 T-cell Th2 nTPM: 23.9
Samples: 4
Max nTPM: 41.1
Min nTPM: 14.7
RHH5305_R3671
41.1
RHH5213_R3584
14.7
RHH5241_R3613
20.2
RHH5270_R3642
19.7
Naive CD4 T-cell nTPM: 32.4
Samples: 4
Max nTPM: 44.3
Min nTPM: 23.4
RHH5306_R3672
33.4
RHH5214_R3585
44.3
RHH5242_R3614
23.4
RHH5271_R3643
28.6
Naive CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 30.3
Min nTPM: 10.7
RHH5201_R3572
10.7
RHH5229_R3601
30.3
RHH5258_R3630
11.1
RHH5287_R3659
28.7
Non-Vd2 gdTCR nTPM: 31.8
Samples: 4
Max nTPM: 40.7
Min nTPM: 23.8
RHH5235_R3607
40.7
RHH5264_R3636
23.8
RHH5207_R3578
25.5
RHH5299_R3665
37.3
T-reg nTPM: 26.4
Samples: 4
Max nTPM: 31.8
Min nTPM: 24.1
RHH5301_R3667
31.8
RHH5237_R3609
24.1
RHH5266_R3638
24.1
RHH5209_R3580
25.5
Terminal effector memory CD4 T-cell nTPM: 31.6
Samples: 2
Max nTPM: 43.6
Min nTPM: 19.6
RHH5243_R3615
43.6
RHH5272_R3644
19.6
Terminal effector memory CD8 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 82.2
Min nTPM: 25.9
RHH5232_R3604
25.9
RHH5204_R3575
82.2
RHH5261_R3633
54.5
RHH5296_R3662
33.4
Vd2 gdTCR nTPM: 50.9
Samples: 4
Max nTPM: 100.1
Min nTPM: 26.9
RHH5234_R3606
26.9
RHH5206_R3577
100.1
RHH5263_R3635
37.9
RHH5298_R3664
38.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
