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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
290.9
nTPM
Monaco:
256.5
nTPM
Schmiedel:
59.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
290.9
HPA sample
nTPM
gdT-cell nTPM: 138.1
Samples: 6
Max nTPM: 173.1
Min nTPM: 100.6
P10809_1007
100.6
P10809_1022
137.9
P10809_1041
154.0
P10809_1060
134.4
P10809_1077
173.1
P10809_1098
128.6
MAIT T-cell nTPM: 149.2
Samples: 6
Max nTPM: 176.7
Min nTPM: 103.1
P10809_1006
103.1
P10809_1024
122.4
P10809_1043
168.5
P10809_1062
156.0
P10809_1083
176.7
P10809_1097
168.2
Memory CD4 T-cell nTPM: 180.6
Samples: 6
Max nTPM: 233.1
Min nTPM: 144.4
P10809_1014
146.0
P10809_1026
233.1
P10809_1045
200.8
P10809_1064
173.1
P10809_1086
144.4
P10809_1113
185.9
Memory CD8 T-cell nTPM: 159.1
Samples: 5
Max nTPM: 190.5
Min nTPM: 134.0
P10809_1012
134.0
P10809_1027
190.5
P10809_1046
151.7
P10809_1065
145.9
P10809_1111
173.2
Naive CD4 T-cell nTPM: 207.7
Samples: 6
Max nTPM: 267.4
Min nTPM: 138.8
P10809_1015
138.8
P10809_1030
210.0
P10809_1049
267.4
P10809_1068
248.3
P10809_1085
192.5
P10809_1112
189.4
Naive CD8 T-cell nTPM: 165.0
Samples: 6
Max nTPM: 210.1
Min nTPM: 142.7
P10809_1016
142.7
P10809_1031
150.7
P10809_1050
155.0
P10809_1069
210.1
P10809_1087
158.0
P10809_1110
173.4
T-reg nTPM: 290.9
Samples: 6
Max nTPM: 413.6
Min nTPM: 222.9
P10809_1018
222.9
P10809_1037
297.2
P10809_1056
413.6
P10809_1075
267.5
P10809_1094
290.1
P10809_1106
254.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
256.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 160.2
Samples: 4
Max nTPM: 226.4
Min nTPM: 93.1
RHH5202_R3573
189.1
RHH5230_R3602
132.0
RHH5259_R3631
93.1
RHH5288_R3660
226.4
Effector memory CD8 T-cell nTPM: 178.8
Samples: 4
Max nTPM: 228.2
Min nTPM: 121.2
RHH5203_R3574
196.6
RHH5231_R3603
228.2
RHH5260_R3632
121.2
RHH5289_R3661
169.2
MAIT T-cell nTPM: 150.5
Samples: 4
Max nTPM: 237.0
Min nTPM: 96.8
RHH5233_R3605
142.8
RHH5205_R3576
96.8
RHH5262_R3634
125.5
RHH5297_R3663
237.0
Memory CD4 T-cell TFH nTPM: 256.5
Samples: 4
Max nTPM: 338.2
Min nTPM: 215.4
RHH5300_R3666
251.5
RHH5236_R3608
338.2
RHH5265_R3637
215.4
RHH5208_R3579
220.9
Memory CD4 T-cell Th1 nTPM: 182.6
Samples: 4
Max nTPM: 306.6
Min nTPM: 96.1
RHH5210_R3581
207.8
RHH5302_R3668
306.6
RHH5238_R3610
119.9
RHH5267_R3639
96.1
Memory CD4 T-cell Th1/Th17 nTPM: 189.9
Samples: 4
Max nTPM: 302.6
Min nTPM: 80.0
RHH5303_R3669
302.6
RHH5211_R3582
249.7
RHH5239_R3611
80.0
RHH5268_R3640
127.3
Memory CD4 T-cell Th17 nTPM: 137.4
Samples: 4
Max nTPM: 202.3
Min nTPM: 94.1
RHH5304_R3670
157.6
RHH5212_R3583
202.3
RHH5240_R3612
94.1
RHH5269_R3641
95.4
Memory CD4 T-cell Th2 nTPM: 211.3
Samples: 4
Max nTPM: 268.7
Min nTPM: 134.1
RHH5305_R3671
240.7
RHH5213_R3584
201.6
RHH5241_R3613
268.7
RHH5270_R3642
134.1
Naive CD4 T-cell nTPM: 209.5
Samples: 4
Max nTPM: 262.6
Min nTPM: 139.1
RHH5306_R3672
224.2
RHH5214_R3585
262.6
RHH5242_R3614
212.2
RHH5271_R3643
139.1
Naive CD8 T-cell nTPM: 173.7
Samples: 4
Max nTPM: 232.3
Min nTPM: 77.0
RHH5201_R3572
232.3
RHH5229_R3601
77.0
RHH5258_R3630
226.1
RHH5287_R3659
159.4
Non-Vd2 gdTCR nTPM: 172.7
Samples: 4
Max nTPM: 256.6
Min nTPM: 86.0
RHH5235_R3607
86.0
RHH5264_R3636
214.6
RHH5207_R3578
133.5
RHH5299_R3665
256.6
T-reg nTPM: 238.1
Samples: 4
Max nTPM: 306.6
Min nTPM: 174.4
RHH5301_R3667
276.7
RHH5237_R3609
306.6
RHH5266_R3638
174.4
RHH5209_R3580
194.6
Terminal effector memory CD4 T-cell nTPM: 144.3
Samples: 2
Max nTPM: 187.1
Min nTPM: 101.4
RHH5243_R3615
101.4
RHH5272_R3644
187.1
Terminal effector memory CD8 T-cell nTPM: 246.2
Samples: 4
Max nTPM: 327.8
Min nTPM: 127.0
RHH5232_R3604
231.9
RHH5204_R3575
327.8
RHH5261_R3633
127.0
RHH5296_R3662
298.0
Vd2 gdTCR nTPM: 205.6
Samples: 4
Max nTPM: 269.6
Min nTPM: 130.0
RHH5234_R3606
176.3
RHH5206_R3577
269.6
RHH5263_R3635
130.0
RHH5298_R3664
246.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.