We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.0
nTPM
Monaco:
32.0
nTPM
Schmiedel:
53.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.0
HPA sample
nTPM
gdT-cell nTPM: 62.7
Samples: 6
Max nTPM: 80.8
Min nTPM: 53.5
P10809_1007
53.5
P10809_1022
63.8
P10809_1041
80.8
P10809_1060
57.5
P10809_1077
58.4
P10809_1098
61.9
MAIT T-cell nTPM: 77.8
Samples: 6
Max nTPM: 104.1
Min nTPM: 48.8
P10809_1006
48.8
P10809_1024
82.0
P10809_1043
104.1
P10809_1062
73.7
P10809_1083
58.4
P10809_1097
99.8
Memory CD4 T-cell nTPM: 71.3
Samples: 6
Max nTPM: 91.0
Min nTPM: 53.4
P10809_1014
53.4
P10809_1026
91.0
P10809_1045
75.6
P10809_1064
72.0
P10809_1086
58.0
P10809_1113
77.5
Memory CD8 T-cell nTPM: 65.9
Samples: 5
Max nTPM: 84.8
Min nTPM: 46.2
P10809_1012
46.2
P10809_1027
63.8
P10809_1046
84.8
P10809_1065
50.9
P10809_1111
83.6
Naive CD4 T-cell nTPM: 88.1
Samples: 6
Max nTPM: 120.7
Min nTPM: 55.8
P10809_1015
55.8
P10809_1030
73.1
P10809_1049
120.7
P10809_1068
95.3
P10809_1085
85.1
P10809_1112
98.3
Naive CD8 T-cell nTPM: 76.5
Samples: 6
Max nTPM: 85.6
Min nTPM: 58.1
P10809_1016
68.7
P10809_1031
85.6
P10809_1050
82.4
P10809_1069
85.3
P10809_1087
58.1
P10809_1110
78.9
T-reg nTPM: 78.3
Samples: 6
Max nTPM: 97.9
Min nTPM: 59.0
P10809_1018
59.0
P10809_1037
65.1
P10809_1056
97.9
P10809_1075
80.2
P10809_1094
89.9
P10809_1106
77.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 28.2
Samples: 4
Max nTPM: 38.0
Min nTPM: 22.9
RHH5202_R3573
27.3
RHH5230_R3602
22.9
RHH5259_R3631
24.5
RHH5288_R3660
38.0
Effector memory CD8 T-cell nTPM: 20.7
Samples: 4
Max nTPM: 31.2
Min nTPM: 10.8
RHH5203_R3574
19.7
RHH5231_R3603
10.8
RHH5260_R3632
31.2
RHH5289_R3661
20.9
MAIT T-cell nTPM: 30.1
Samples: 4
Max nTPM: 34.2
Min nTPM: 24.4
RHH5233_R3605
24.4
RHH5205_R3576
30.7
RHH5262_R3634
30.9
RHH5297_R3663
34.2
Memory CD4 T-cell TFH nTPM: 24.2
Samples: 4
Max nTPM: 36.7
Min nTPM: 18.1
RHH5300_R3666
19.2
RHH5236_R3608
36.7
RHH5265_R3637
18.1
RHH5208_R3579
22.7
Memory CD4 T-cell Th1 nTPM: 31.2
Samples: 4
Max nTPM: 42.8
Min nTPM: 23.8
RHH5210_R3581
33.7
RHH5302_R3668
42.8
RHH5238_R3610
23.8
RHH5267_R3639
24.5
Memory CD4 T-cell Th1/Th17 nTPM: 27.0
Samples: 4
Max nTPM: 34.3
Min nTPM: 12.7
RHH5303_R3669
34.3
RHH5211_R3582
32.5
RHH5239_R3611
12.7
RHH5268_R3640
28.5
Memory CD4 T-cell Th17 nTPM: 26.1
Samples: 4
Max nTPM: 37.0
Min nTPM: 12.0
RHH5304_R3670
37.0
RHH5212_R3583
35.2
RHH5240_R3612
12.0
RHH5269_R3641
20.0
Memory CD4 T-cell Th2 nTPM: 26.0
Samples: 4
Max nTPM: 36.1
Min nTPM: 17.2
RHH5305_R3671
36.1
RHH5213_R3584
32.1
RHH5241_R3613
18.7
RHH5270_R3642
17.2
Naive CD4 T-cell nTPM: 28.4
Samples: 4
Max nTPM: 47.9
Min nTPM: 11.9
RHH5306_R3672
37.2
RHH5214_R3585
47.9
RHH5242_R3614
16.5
RHH5271_R3643
11.9
Naive CD8 T-cell nTPM: 32.0
Samples: 4
Max nTPM: 42.6
Min nTPM: 21.7
RHH5201_R3572
21.7
RHH5229_R3601
25.5
RHH5258_R3630
38.3
RHH5287_R3659
42.6
Non-Vd2 gdTCR nTPM: 22.4
Samples: 4
Max nTPM: 30.5
Min nTPM: 18.8
RHH5235_R3607
19.7
RHH5264_R3636
20.7
RHH5207_R3578
18.8
RHH5299_R3665
30.5
T-reg nTPM: 29.5
Samples: 4
Max nTPM: 37.2
Min nTPM: 23.5
RHH5301_R3667
37.2
RHH5237_R3609
27.6
RHH5266_R3638
23.5
RHH5209_R3580
29.5
Terminal effector memory CD4 T-cell nTPM: 15.4
Samples: 2
Max nTPM: 20.8
Min nTPM: 10.0
RHH5243_R3615
10.0
RHH5272_R3644
20.8
Terminal effector memory CD8 T-cell nTPM: 24.4
Samples: 4
Max nTPM: 33.0
Min nTPM: 19.4
RHH5232_R3604
24.2
RHH5204_R3575
33.0
RHH5261_R3633
21.1
RHH5296_R3662
19.4
Vd2 gdTCR nTPM: 29.7
Samples: 4
Max nTPM: 35.5
Min nTPM: 18.8
RHH5234_R3606
33.0
RHH5206_R3577
35.5
RHH5263_R3635
18.8
RHH5298_R3664
31.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
