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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.2
nTPM
Monaco:
90.1
nTPM
Schmiedel:
791.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.2
HPA sample
nTPM
gdT-cell nTPM: 58.2
Samples: 6
Max nTPM: 67.2
Min nTPM: 40.6
P10809_1007
62.4
P10809_1022
64.3
P10809_1041
64.5
P10809_1060
67.2
P10809_1077
50.2
P10809_1098
40.6
MAIT T-cell nTPM: 52.4
Samples: 6
Max nTPM: 64.0
Min nTPM: 34.9
P10809_1006
64.0
P10809_1024
59.5
P10809_1043
48.7
P10809_1062
54.2
P10809_1083
52.9
P10809_1097
34.9
Memory CD4 T-cell nTPM: 40.8
Samples: 6
Max nTPM: 58.7
Min nTPM: 23.0
P10809_1014
48.7
P10809_1026
58.7
P10809_1045
40.2
P10809_1064
33.2
P10809_1086
41.1
P10809_1113
23.0
Memory CD8 T-cell nTPM: 45.2
Samples: 5
Max nTPM: 55.8
Min nTPM: 28.7
P10809_1012
55.8
P10809_1027
39.3
P10809_1046
51.9
P10809_1065
50.1
P10809_1111
28.7
Naive CD4 T-cell nTPM: 35.6
Samples: 6
Max nTPM: 45.5
Min nTPM: 23.4
P10809_1015
45.5
P10809_1030
35.9
P10809_1049
32.9
P10809_1068
38.0
P10809_1085
38.0
P10809_1112
23.4
Naive CD8 T-cell nTPM: 48.0
Samples: 6
Max nTPM: 62.2
Min nTPM: 31.7
P10809_1016
62.2
P10809_1031
60.3
P10809_1050
40.6
P10809_1069
51.7
P10809_1087
41.7
P10809_1110
31.7
T-reg nTPM: 54.7
Samples: 6
Max nTPM: 68.9
Min nTPM: 43.3
P10809_1018
60.9
P10809_1037
50.2
P10809_1056
68.9
P10809_1075
46.9
P10809_1094
58.1
P10809_1106
43.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.8
Samples: 4
Max nTPM: 77.3
Min nTPM: 18.8
RHH5202_R3573
77.3
RHH5230_R3602
29.2
RHH5259_R3631
18.8
RHH5288_R3660
61.7
Effector memory CD8 T-cell nTPM: 53.1
Samples: 4
Max nTPM: 80.4
Min nTPM: 34.9
RHH5203_R3574
80.4
RHH5231_R3603
45.2
RHH5260_R3632
34.9
RHH5289_R3661
51.7
MAIT T-cell nTPM: 54.4
Samples: 4
Max nTPM: 75.3
Min nTPM: 30.0
RHH5233_R3605
49.6
RHH5205_R3576
75.3
RHH5262_R3634
30.0
RHH5297_R3663
62.8
Memory CD4 T-cell TFH nTPM: 22.7
Samples: 4
Max nTPM: 35.6
Min nTPM: 14.6
RHH5300_R3666
35.6
RHH5236_R3608
14.6
RHH5265_R3637
17.0
RHH5208_R3579
23.6
Memory CD4 T-cell Th1 nTPM: 36.4
Samples: 4
Max nTPM: 64.6
Min nTPM: 17.6
RHH5210_R3581
64.6
RHH5302_R3668
45.3
RHH5238_R3610
17.6
RHH5267_R3639
18.1
Memory CD4 T-cell Th1/Th17 nTPM: 41.4
Samples: 4
Max nTPM: 97.0
Min nTPM: 11.5
RHH5303_R3669
38.2
RHH5211_R3582
97.0
RHH5239_R3611
11.5
RHH5268_R3640
18.7
Memory CD4 T-cell Th17 nTPM: 36.0
Samples: 4
Max nTPM: 71.3
Min nTPM: 12.9
RHH5304_R3670
46.3
RHH5212_R3583
71.3
RHH5240_R3612
12.9
RHH5269_R3641
13.5
Memory CD4 T-cell Th2 nTPM: 41.8
Samples: 4
Max nTPM: 75.9
Min nTPM: 18.5
RHH5305_R3671
48.1
RHH5213_R3584
75.9
RHH5241_R3613
18.5
RHH5270_R3642
24.5
Naive CD4 T-cell nTPM: 26.6
Samples: 4
Max nTPM: 45.5
Min nTPM: 16.4
RHH5306_R3672
27.2
RHH5214_R3585
45.5
RHH5242_R3614
17.1
RHH5271_R3643
16.4
Naive CD8 T-cell nTPM: 19.9
Samples: 4
Max nTPM: 28.0
Min nTPM: 14.0
RHH5201_R3572
23.6
RHH5229_R3601
14.0
RHH5258_R3630
14.1
RHH5287_R3659
28.0
Non-Vd2 gdTCR nTPM: 70.5
Samples: 4
Max nTPM: 109.5
Min nTPM: 33.6
RHH5235_R3607
33.6
RHH5264_R3636
48.8
RHH5207_R3578
109.5
RHH5299_R3665
90.2
T-reg nTPM: 39.9
Samples: 4
Max nTPM: 63.5
Min nTPM: 17.9
RHH5301_R3667
57.8
RHH5237_R3609
17.9
RHH5266_R3638
20.2
RHH5209_R3580
63.5
Terminal effector memory CD4 T-cell nTPM: 19.9
Samples: 2
Max nTPM: 22.4
Min nTPM: 17.4
RHH5243_R3615
17.4
RHH5272_R3644
22.4
Terminal effector memory CD8 T-cell nTPM: 59.9
Samples: 4
Max nTPM: 96.1
Min nTPM: 27.9
RHH5232_R3604
30.8
RHH5204_R3575
96.1
RHH5261_R3633
27.9
RHH5296_R3662
84.7
Vd2 gdTCR nTPM: 90.1
Samples: 4
Max nTPM: 170.2
Min nTPM: 47.1
RHH5234_R3606
52.8
RHH5206_R3577
170.2
RHH5263_R3635
47.1
RHH5298_R3664
90.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
