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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.7
nTPM
Monaco:
107.5
nTPM
Schmiedel:
120.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.7
HPA sample
nTPM
gdT-cell nTPM: 18.5
Samples: 6
Max nTPM: 24.2
Min nTPM: 7.9
P10809_1007
17.8
P10809_1022
20.8
P10809_1041
24.0
P10809_1060
7.9
P10809_1077
16.2
P10809_1098
24.2
MAIT T-cell nTPM: 19.3
Samples: 6
Max nTPM: 32.2
Min nTPM: 11.6
P10809_1006
32.2
P10809_1024
13.0
P10809_1043
22.2
P10809_1062
11.6
P10809_1083
17.9
P10809_1097
18.8
Memory CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 19.8
Min nTPM: 14.2
P10809_1014
18.5
P10809_1026
14.8
P10809_1045
19.8
P10809_1064
15.7
P10809_1086
14.8
P10809_1113
14.2
Memory CD8 T-cell nTPM: 18.3
Samples: 5
Max nTPM: 22.5
Min nTPM: 13.5
P10809_1012
22.5
P10809_1027
13.5
P10809_1046
20.4
P10809_1065
14.9
P10809_1111
20.3
Naive CD4 T-cell nTPM: 19.8
Samples: 6
Max nTPM: 25.1
Min nTPM: 14.7
P10809_1015
18.4
P10809_1030
14.7
P10809_1049
16.4
P10809_1068
25.1
P10809_1085
22.9
P10809_1112
21.0
Naive CD8 T-cell nTPM: 18.9
Samples: 6
Max nTPM: 25.7
Min nTPM: 14.4
P10809_1016
18.4
P10809_1031
16.3
P10809_1050
18.4
P10809_1069
20.2
P10809_1087
14.4
P10809_1110
25.7
T-reg nTPM: 14.5
Samples: 6
Max nTPM: 22.9
Min nTPM: 4.7
P10809_1018
22.9
P10809_1037
14.2
P10809_1056
16.0
P10809_1075
11.3
P10809_1094
4.7
P10809_1106
17.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 72.8
Samples: 4
Max nTPM: 94.3
Min nTPM: 46.8
RHH5202_R3573
46.8
RHH5230_R3602
78.5
RHH5259_R3631
94.3
RHH5288_R3660
71.4
Effector memory CD8 T-cell nTPM: 101.4
Samples: 4
Max nTPM: 147.3
Min nTPM: 72.6
RHH5203_R3574
77.5
RHH5231_R3603
108.1
RHH5260_R3632
147.3
RHH5289_R3661
72.6
MAIT T-cell nTPM: 85.8
Samples: 4
Max nTPM: 94.1
Min nTPM: 71.6
RHH5233_R3605
71.6
RHH5205_R3576
94.1
RHH5262_R3634
88.4
RHH5297_R3663
89.2
Memory CD4 T-cell TFH nTPM: 77.3
Samples: 4
Max nTPM: 94.6
Min nTPM: 62.8
RHH5300_R3666
80.6
RHH5236_R3608
62.8
RHH5265_R3637
94.6
RHH5208_R3579
71.3
Memory CD4 T-cell Th1 nTPM: 79.9
Samples: 4
Max nTPM: 97.4
Min nTPM: 60.4
RHH5210_R3581
60.4
RHH5302_R3668
70.5
RHH5238_R3610
91.3
RHH5267_R3639
97.4
Memory CD4 T-cell Th1/Th17 nTPM: 94.5
Samples: 4
Max nTPM: 108.2
Min nTPM: 83.7
RHH5303_R3669
83.7
RHH5211_R3582
101.9
RHH5239_R3611
108.2
RHH5268_R3640
84.3
Memory CD4 T-cell Th17 nTPM: 107.5
Samples: 4
Max nTPM: 127.8
Min nTPM: 87.8
RHH5304_R3670
103.8
RHH5212_R3583
87.8
RHH5240_R3612
110.4
RHH5269_R3641
127.8
Memory CD4 T-cell Th2 nTPM: 86.4
Samples: 4
Max nTPM: 105.0
Min nTPM: 49.7
RHH5305_R3671
96.9
RHH5213_R3584
93.8
RHH5241_R3613
49.7
RHH5270_R3642
105.0
Naive CD4 T-cell nTPM: 81.3
Samples: 4
Max nTPM: 91.3
Min nTPM: 72.3
RHH5306_R3672
72.3
RHH5214_R3585
72.5
RHH5242_R3614
89.0
RHH5271_R3643
91.3
Naive CD8 T-cell nTPM: 83.7
Samples: 4
Max nTPM: 104.0
Min nTPM: 56.2
RHH5201_R3572
56.2
RHH5229_R3601
104.0
RHH5258_R3630
85.6
RHH5287_R3659
89.0
Non-Vd2 gdTCR nTPM: 93.8
Samples: 4
Max nTPM: 105.8
Min nTPM: 81.3
RHH5235_R3607
105.8
RHH5264_R3636
103.7
RHH5207_R3578
81.3
RHH5299_R3665
84.2
T-reg nTPM: 85.3
Samples: 4
Max nTPM: 104.1
Min nTPM: 76.5
RHH5301_R3667
80.0
RHH5237_R3609
76.5
RHH5266_R3638
80.5
RHH5209_R3580
104.1
Terminal effector memory CD4 T-cell nTPM: 99.9
Samples: 2
Max nTPM: 100.0
Min nTPM: 99.8
RHH5243_R3615
100.0
RHH5272_R3644
99.8
Terminal effector memory CD8 T-cell nTPM: 89.3
Samples: 4
Max nTPM: 115.2
Min nTPM: 68.4
RHH5232_R3604
96.3
RHH5204_R3575
77.4
RHH5261_R3633
115.2
RHH5296_R3662
68.4
Vd2 gdTCR nTPM: 93.2
Samples: 4
Max nTPM: 144.5
Min nTPM: 66.0
RHH5234_R3606
80.4
RHH5206_R3577
81.7
RHH5263_R3635
144.5
RHH5298_R3664
66.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
