We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
159.6
nTPM
Monaco:
17.1
nTPM
Schmiedel:
12.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
159.6
HPA sample
nTPM
gdT-cell nTPM: 101.9
Samples: 6
Max nTPM: 130.4
Min nTPM: 86.1
P10809_1007
87.3
P10809_1022
99.8
P10809_1041
130.4
P10809_1060
86.1
P10809_1077
112.9
P10809_1098
94.7
MAIT T-cell nTPM: 104.8
Samples: 6
Max nTPM: 133.0
Min nTPM: 67.6
P10809_1006
80.3
P10809_1024
118.6
P10809_1043
130.1
P10809_1062
99.4
P10809_1083
67.6
P10809_1097
133.0
Memory CD4 T-cell nTPM: 120.7
Samples: 6
Max nTPM: 141.6
Min nTPM: 102.5
P10809_1014
112.9
P10809_1026
141.6
P10809_1045
131.0
P10809_1064
113.0
P10809_1086
102.5
P10809_1113
123.4
Memory CD8 T-cell nTPM: 107.7
Samples: 5
Max nTPM: 128.9
Min nTPM: 96.3
P10809_1012
96.3
P10809_1027
98.9
P10809_1046
128.9
P10809_1065
104.8
P10809_1111
109.4
Naive CD4 T-cell nTPM: 107.7
Samples: 6
Max nTPM: 143.0
Min nTPM: 85.3
P10809_1015
97.3
P10809_1030
85.3
P10809_1049
143.0
P10809_1068
111.3
P10809_1085
95.8
P10809_1112
113.3
Naive CD8 T-cell nTPM: 108.9
Samples: 6
Max nTPM: 130.1
Min nTPM: 90.5
P10809_1016
130.1
P10809_1031
100.7
P10809_1050
109.2
P10809_1069
113.1
P10809_1087
90.5
P10809_1110
109.7
T-reg nTPM: 159.7
Samples: 6
Max nTPM: 232.9
Min nTPM: 118.9
P10809_1018
156.3
P10809_1037
118.9
P10809_1056
232.9
P10809_1075
163.7
P10809_1094
152.3
P10809_1106
133.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 15.5
Min nTPM: 5.4
RHH5202_R3573
9.3
RHH5230_R3602
5.4
RHH5259_R3631
15.5
RHH5288_R3660
10.1
Effector memory CD8 T-cell nTPM: 6.8
Samples: 4
Max nTPM: 10.1
Min nTPM: 2.4
RHH5203_R3574
6.2
RHH5231_R3603
8.4
RHH5260_R3632
10.1
RHH5289_R3661
2.4
MAIT T-cell nTPM: 5.6
Samples: 4
Max nTPM: 8.1
Min nTPM: 1.3
RHH5233_R3605
1.3
RHH5205_R3576
8.1
RHH5262_R3634
6.6
RHH5297_R3663
6.5
Memory CD4 T-cell TFH nTPM: 6.1
Samples: 4
Max nTPM: 10.1
Min nTPM: 3.5
RHH5300_R3666
6.4
RHH5236_R3608
10.1
RHH5265_R3637
4.3
RHH5208_R3579
3.5
Memory CD4 T-cell Th1 nTPM: 17.1
Samples: 4
Max nTPM: 30.9
Min nTPM: 10.6
RHH5210_R3581
10.6
RHH5302_R3668
14.1
RHH5238_R3610
30.9
RHH5267_R3639
12.8
Memory CD4 T-cell Th1/Th17 nTPM: 13.8
Samples: 4
Max nTPM: 23.7
Min nTPM: 5.7
RHH5303_R3669
5.7
RHH5211_R3582
7.5
RHH5239_R3611
23.7
RHH5268_R3640
18.3
Memory CD4 T-cell Th17 nTPM: 15.5
Samples: 4
Max nTPM: 20.3
Min nTPM: 8.4
RHH5304_R3670
14.3
RHH5212_R3583
19.1
RHH5240_R3612
20.3
RHH5269_R3641
8.4
Memory CD4 T-cell Th2 nTPM: 10.7
Samples: 4
Max nTPM: 12.6
Min nTPM: 6.9
RHH5305_R3671
11.6
RHH5213_R3584
12.6
RHH5241_R3613
6.9
RHH5270_R3642
11.7
Naive CD4 T-cell nTPM: 15.1
Samples: 4
Max nTPM: 19.4
Min nTPM: 8.3
RHH5306_R3672
19.4
RHH5214_R3585
8.3
RHH5242_R3614
17.0
RHH5271_R3643
15.6
Naive CD8 T-cell nTPM: 14.9
Samples: 4
Max nTPM: 21.3
Min nTPM: 7.3
RHH5201_R3572
18.2
RHH5229_R3601
21.3
RHH5258_R3630
7.3
RHH5287_R3659
12.9
Non-Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 18.7
Min nTPM: 1.5
RHH5235_R3607
11.4
RHH5264_R3636
2.8
RHH5207_R3578
1.5
RHH5299_R3665
18.7
T-reg nTPM: 12.9
Samples: 4
Max nTPM: 19.6
Min nTPM: 5.6
RHH5301_R3667
19.6
RHH5237_R3609
12.1
RHH5266_R3638
5.6
RHH5209_R3580
14.2
Terminal effector memory CD4 T-cell nTPM: 7.3
Samples: 2
Max nTPM: 7.6
Min nTPM: 7.0
RHH5243_R3615
7.6
RHH5272_R3644
7.0
Terminal effector memory CD8 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 36.6
Min nTPM: 1.7
RHH5232_R3604
1.7
RHH5204_R3575
36.6
RHH5261_R3633
6.4
RHH5296_R3662
8.4
Vd2 gdTCR nTPM: 16.5
Samples: 4
Max nTPM: 28.6
Min nTPM: 5.6
RHH5234_R3606
5.6
RHH5206_R3577
28.6
RHH5263_R3635
16.6
RHH5298_R3664
15.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
