HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:26.5 nTPM
HPA Brain:27.7 nTPM
GTEx:26.5 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:30.9 nTPM
Allen mouse:27.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062439
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
1855 Male, age 76, left hemisphere 28.6
2621 Female, age 67, right hemisphere 27.8
1898 Male, age 80, left hemisphere 27.6
2529 Female, age 94, left hemisphere 25.3
1911 Female, age 85, right hemisphere 24.5
2148 Female, age 91, left hemisphere 24.1
Dentate gyrus
nTPM: 26.3
2010 Male, age 76, both hemispheres 29.6
2530 Female, age 94, left hemisphere 27.7
1927 Female, age 91, both hemispheres 26.7
2246 Female, age 85, both hemispheres 25.5
2531 Female, age 67, both hemispheres 25.4
2528 Male, age 74, both hemispheres 23.0
Entorhinal gyrus
nTPM: 26.7
2613 Female, age 94, left hemisphere 27.4
1938 Female, age 85, left hemisphere 27.3
2764 Male, age 80, right hemisphere 27.1
1787 Male, age 76, left hemisphere 27.0
2686 Male, age 75, right hemisphere 26.0
2117 Female, age 91, right hemisphere 25.5
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 34.3
1873 Female, age 85, both hemispheres 27.4
2045 Male, age 76, both hemispheres 24.3
2527 Male, age 74, both hemispheres 24.1
2082 Female, age 91, right hemisphere 23.2
Hippocampus, CA2
nTPM: 25.8
1892 Male, age 76, both hemispheres 31.5
1963 Male, age 80, left hemisphere 26.8
2437 Female, age 94, left hemisphere 26.0
1940 Female, age 85, left hemisphere 23.6
2249 Male, age 74, both hemispheres 23.5
2113 Female, age 91, right hemisphere 23.4
Hippocampus, CA3
nTPM: 27.7
1867 Male, age 76, both hemispheres 30.8
2620 Female, age 94, left hemisphere 30.1
2137 Male, age 80, left hemisphere 29.2
2861 Female, age 67, both hemispheres 26.2
1891 Female, age 85, both hemispheres 25.4
2436 Male, age 74, both hemispheres 24.7
Parahippocampal cortex
nTPM: 24.9
2245 Female, age 91, both hemispheres 26.4
2018 Male, age 76, both hemispheres 26.3
2532 Female, age 72, left hemisphere 26.1
1933 Female, age 85, both hemispheres 25.8
1850 Male, age 80, both hemispheres 25.6
2250 Female, age 67, right hemisphere 25.3
1990 Female, age 91, right hemisphere 24.4
2622 Female, age 67, right hemisphere 23.4
2692 Male, age 74, both hemispheres 23.4
2693 Female, age 94, both hemispheres 22.1
Perirhinal gyrus
nTPM: 26.0
1847 Female, age 91, left hemisphere 27.1
1841 Female, age 85, right hemisphere 26.9
1794 Male, age 80, right hemisphere 26.2
2521 Female, age 94, right hemisphere 25.6
2848 Male, age 76, right hemisphere 24.3
Subiculum
nTPM: 26.8
2438 Female, age 94, left hemisphere 31.0
2042 Male, age 76, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.2
1977 Female, age 85, both hemispheres 25.8
2619 Male, age 74, both hemispheres 25.2
2729 Female, age 91, right hemisphere 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.5
Samples: 197

Max nTPM: 46.1
Min nTPM: 13.1
Std nTPM: 5.3
Median nTPM: 26.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 46.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 44.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 41.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 40.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 36.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 36.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 36.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.5
FF:10169-103B7 60 years, female 69.5
FF:10153-102I9 76 years, female 49.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Subiculum
nTPM: 25.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 23.0
Sample A Female 30.7
Sample B Female 23.0
Sample C Male 25.4
Sample D Male 23.4
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 35.4
Min nTPM: 26.4
Sample A Female 35.4
Sample B Female 32.2
Sample C Male 27.0
Sample D Male 26.4
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 27.4
Min nTPM: 22.4
Sample A Female 27.4
Sample B Female 24.0
Sample C Male 25.0
Sample D Male 22.4
Ventral hippocampus
nTPM: 28.1
Samples: 4

Max nTPM: 33.5
Min nTPM: 22.0
Sample A Female 26.9
Sample B Female 22.0
Sample C Male 33.5
Sample D Male 29.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 31.5
Min nTPM: 28.5
Sample A Male 29.7
Sample B Male 28.5
Sample C Female 31.5
Sample D Female 29.7
Hippocampal formation
nTPM: 30.9
Samples: 4

Max nTPM: 33.0
Min nTPM: 29.3
Sample A Male 33.0
Sample B Male 29.3
Sample C Female 30.5
Sample D Female 30.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.3
686195 Antisense, RP_040916_01_A03, Mouse strain C57BL/6J (56 days, male) 29.1
77910701 Antisense, RP_070208_04_F02, Mouse strain C57BL/6J (56 days, male) 25.6

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