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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
285.1
nTPM
Monaco:
471.1
nTPM
Schmiedel:
245.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
285.1
HPA sample
nTPM
gdT-cell nTPM: 196.6
Samples: 6
Max nTPM: 248.5
Min nTPM: 132.5
P10809_1007
132.5
P10809_1022
214.1
P10809_1041
248.5
P10809_1060
194.0
P10809_1077
182.0
P10809_1098
208.6
MAIT T-cell nTPM: 215.0
Samples: 6
Max nTPM: 247.6
Min nTPM: 163.9
P10809_1006
163.9
P10809_1024
193.6
P10809_1043
247.6
P10809_1062
232.2
P10809_1083
209.5
P10809_1097
242.9
Memory CD4 T-cell nTPM: 223.3
Samples: 6
Max nTPM: 261.9
Min nTPM: 179.3
P10809_1014
179.3
P10809_1026
245.2
P10809_1045
261.9
P10809_1064
216.6
P10809_1086
206.4
P10809_1113
230.4
Memory CD8 T-cell nTPM: 206.1
Samples: 5
Max nTPM: 239.6
Min nTPM: 180.3
P10809_1012
180.3
P10809_1027
226.2
P10809_1046
239.6
P10809_1065
181.2
P10809_1111
203.3
Naive CD4 T-cell nTPM: 244.1
Samples: 6
Max nTPM: 290.9
Min nTPM: 170.0
P10809_1015
170.0
P10809_1030
228.6
P10809_1049
271.7
P10809_1068
290.9
P10809_1085
230.5
P10809_1112
273.0
Naive CD8 T-cell nTPM: 210.6
Samples: 6
Max nTPM: 249.6
Min nTPM: 155.9
P10809_1016
183.3
P10809_1031
249.6
P10809_1050
205.2
P10809_1069
248.7
P10809_1087
155.9
P10809_1110
220.9
T-reg nTPM: 285.1
Samples: 6
Max nTPM: 427.8
Min nTPM: 236.9
P10809_1018
244.4
P10809_1037
263.9
P10809_1056
427.8
P10809_1075
236.9
P10809_1094
288.9
P10809_1106
248.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
471.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 419.2
Samples: 4
Max nTPM: 510.3
Min nTPM: 309.3
RHH5202_R3573
438.9
RHH5230_R3602
510.3
RHH5259_R3631
309.3
RHH5288_R3660
418.3
Effector memory CD8 T-cell nTPM: 396.9
Samples: 4
Max nTPM: 439.8
Min nTPM: 367.5
RHH5203_R3574
411.5
RHH5231_R3603
368.6
RHH5260_R3632
367.5
RHH5289_R3661
439.8
MAIT T-cell nTPM: 371.2
Samples: 4
Max nTPM: 416.2
Min nTPM: 349.2
RHH5233_R3605
353.7
RHH5205_R3576
416.2
RHH5262_R3634
349.2
RHH5297_R3663
365.7
Memory CD4 T-cell TFH nTPM: 441.4
Samples: 4
Max nTPM: 548.7
Min nTPM: 387.5
RHH5300_R3666
433.1
RHH5236_R3608
548.7
RHH5265_R3637
387.5
RHH5208_R3579
396.4
Memory CD4 T-cell Th1 nTPM: 423.2
Samples: 4
Max nTPM: 478.6
Min nTPM: 347.8
RHH5210_R3581
478.6
RHH5302_R3668
432.1
RHH5238_R3610
347.8
RHH5267_R3639
434.4
Memory CD4 T-cell Th1/Th17 nTPM: 465.1
Samples: 4
Max nTPM: 545.9
Min nTPM: 411.6
RHH5303_R3669
490.5
RHH5211_R3582
545.9
RHH5239_R3611
412.5
RHH5268_R3640
411.6
Memory CD4 T-cell Th17 nTPM: 470.5
Samples: 4
Max nTPM: 551.1
Min nTPM: 409.9
RHH5304_R3670
477.0
RHH5212_R3583
444.0
RHH5240_R3612
551.1
RHH5269_R3641
409.9
Memory CD4 T-cell Th2 nTPM: 471.2
Samples: 4
Max nTPM: 498.5
Min nTPM: 447.2
RHH5305_R3671
476.1
RHH5213_R3584
462.8
RHH5241_R3613
447.2
RHH5270_R3642
498.5
Naive CD4 T-cell nTPM: 443.8
Samples: 4
Max nTPM: 519.7
Min nTPM: 383.9
RHH5306_R3672
467.4
RHH5214_R3585
519.7
RHH5242_R3614
383.9
RHH5271_R3643
404.1
Naive CD8 T-cell nTPM: 422.5
Samples: 4
Max nTPM: 531.9
Min nTPM: 354.8
RHH5201_R3572
531.9
RHH5229_R3601
354.8
RHH5258_R3630
366.9
RHH5287_R3659
436.5
Non-Vd2 gdTCR nTPM: 373.2
Samples: 4
Max nTPM: 413.1
Min nTPM: 335.3
RHH5235_R3607
413.1
RHH5264_R3636
384.1
RHH5207_R3578
360.1
RHH5299_R3665
335.3
T-reg nTPM: 438.2
Samples: 4
Max nTPM: 556.5
Min nTPM: 368.8
RHH5301_R3667
368.8
RHH5237_R3609
556.5
RHH5266_R3638
433.4
RHH5209_R3580
394.1
Terminal effector memory CD4 T-cell nTPM: 349.6
Samples: 2
Max nTPM: 376.8
Min nTPM: 322.4
RHH5243_R3615
376.8
RHH5272_R3644
322.4
Terminal effector memory CD8 T-cell nTPM: 349.2
Samples: 4
Max nTPM: 408.7
Min nTPM: 308.3
RHH5232_R3604
408.7
RHH5204_R3575
331.6
RHH5261_R3633
308.3
RHH5296_R3662
348.3
Vd2 gdTCR nTPM: 356.4
Samples: 4
Max nTPM: 398.9
Min nTPM: 317.2
RHH5234_R3606
336.9
RHH5206_R3577
372.4
RHH5263_R3635
398.9
RHH5298_R3664
317.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.