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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
347.4
nTPM
Monaco:
209.6
nTPM
Schmiedel:
321.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
347.4
HPA sample
nTPM
gdT-cell nTPM: 211.1
Samples: 6
Max nTPM: 282.8
Min nTPM: 148.3
P10809_1007
148.3
P10809_1022
244.1
P10809_1041
282.8
P10809_1060
180.8
P10809_1077
186.8
P10809_1098
223.9
MAIT T-cell nTPM: 225.8
Samples: 6
Max nTPM: 277.5
Min nTPM: 132.6
P10809_1006
132.6
P10809_1024
267.0
P10809_1043
277.5
P10809_1062
234.1
P10809_1083
167.7
P10809_1097
275.9
Memory CD4 T-cell nTPM: 252.8
Samples: 6
Max nTPM: 301.3
Min nTPM: 183.2
P10809_1014
183.2
P10809_1026
285.5
P10809_1045
301.3
P10809_1064
243.7
P10809_1086
219.1
P10809_1113
284.2
Memory CD8 T-cell nTPM: 226.7
Samples: 5
Max nTPM: 261.9
Min nTPM: 157.3
P10809_1012
157.3
P10809_1027
232.9
P10809_1046
261.9
P10809_1065
240.3
P10809_1111
241.2
Naive CD4 T-cell nTPM: 267.1
Samples: 6
Max nTPM: 388.2
Min nTPM: 166.3
P10809_1015
166.3
P10809_1030
325.1
P10809_1049
388.2
P10809_1068
218.7
P10809_1085
249.5
P10809_1112
254.7
Naive CD8 T-cell nTPM: 248.3
Samples: 6
Max nTPM: 349.3
Min nTPM: 183.3
P10809_1016
183.3
P10809_1031
349.3
P10809_1050
273.2
P10809_1069
255.2
P10809_1087
191.6
P10809_1110
236.9
T-reg nTPM: 347.4
Samples: 6
Max nTPM: 414.5
Min nTPM: 213.6
P10809_1018
213.6
P10809_1037
394.5
P10809_1056
414.5
P10809_1075
338.7
P10809_1094
369.1
P10809_1106
353.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
209.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 174.4
Samples: 4
Max nTPM: 210.7
Min nTPM: 135.7
RHH5202_R3573
210.7
RHH5230_R3602
151.3
RHH5259_R3631
135.7
RHH5288_R3660
200.0
Effector memory CD8 T-cell nTPM: 167.5
Samples: 4
Max nTPM: 222.5
Min nTPM: 135.3
RHH5203_R3574
222.5
RHH5231_R3603
152.0
RHH5260_R3632
135.3
RHH5289_R3661
160.0
MAIT T-cell nTPM: 197.6
Samples: 4
Max nTPM: 217.0
Min nTPM: 160.2
RHH5233_R3605
203.5
RHH5205_R3576
160.2
RHH5262_R3634
217.0
RHH5297_R3663
209.7
Memory CD4 T-cell TFH nTPM: 196.4
Samples: 4
Max nTPM: 209.0
Min nTPM: 187.6
RHH5300_R3666
192.0
RHH5236_R3608
187.6
RHH5265_R3637
196.8
RHH5208_R3579
209.0
Memory CD4 T-cell Th1 nTPM: 181.5
Samples: 4
Max nTPM: 233.5
Min nTPM: 133.3
RHH5210_R3581
233.5
RHH5302_R3668
206.3
RHH5238_R3610
133.3
RHH5267_R3639
152.7
Memory CD4 T-cell Th1/Th17 nTPM: 163.8
Samples: 4
Max nTPM: 217.2
Min nTPM: 111.9
RHH5303_R3669
217.2
RHH5211_R3582
178.0
RHH5239_R3611
111.9
RHH5268_R3640
148.0
Memory CD4 T-cell Th17 nTPM: 163.1
Samples: 4
Max nTPM: 200.0
Min nTPM: 138.7
RHH5304_R3670
200.0
RHH5212_R3583
166.1
RHH5240_R3612
147.4
RHH5269_R3641
138.7
Memory CD4 T-cell Th2 nTPM: 209.6
Samples: 4
Max nTPM: 233.5
Min nTPM: 185.1
RHH5305_R3671
185.1
RHH5213_R3584
222.1
RHH5241_R3613
233.5
RHH5270_R3642
197.7
Naive CD4 T-cell nTPM: 182.1
Samples: 4
Max nTPM: 213.2
Min nTPM: 149.0
RHH5306_R3672
182.8
RHH5214_R3585
213.2
RHH5242_R3614
149.0
RHH5271_R3643
183.2
Naive CD8 T-cell nTPM: 204.8
Samples: 4
Max nTPM: 247.4
Min nTPM: 119.0
RHH5201_R3572
247.4
RHH5229_R3601
119.0
RHH5258_R3630
239.8
RHH5287_R3659
212.9
Non-Vd2 gdTCR nTPM: 169.6
Samples: 4
Max nTPM: 206.3
Min nTPM: 128.0
RHH5235_R3607
128.0
RHH5264_R3636
206.3
RHH5207_R3578
154.8
RHH5299_R3665
189.4
T-reg nTPM: 187.5
Samples: 4
Max nTPM: 210.3
Min nTPM: 162.9
RHH5301_R3667
210.3
RHH5237_R3609
200.4
RHH5266_R3638
162.9
RHH5209_R3580
176.4
Terminal effector memory CD4 T-cell nTPM: 185.4
Samples: 2
Max nTPM: 213.2
Min nTPM: 157.5
RHH5243_R3615
157.5
RHH5272_R3644
213.2
Terminal effector memory CD8 T-cell nTPM: 200.8
Samples: 4
Max nTPM: 256.3
Min nTPM: 142.3
RHH5232_R3604
208.5
RHH5204_R3575
256.3
RHH5261_R3633
142.3
RHH5296_R3662
196.1
Vd2 gdTCR nTPM: 180.2
Samples: 4
Max nTPM: 224.7
Min nTPM: 145.8
RHH5234_R3606
172.0
RHH5206_R3577
224.7
RHH5263_R3635
145.8
RHH5298_R3664
178.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.