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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
103.8
nTPM
Monaco:
43.0
nTPM
Schmiedel:
0.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.8
HPA sample
nTPM
gdT-cell nTPM: 84.1
Samples: 6
Max nTPM: 107.1
Min nTPM: 66.4
P10809_1007
66.4
P10809_1022
93.9
P10809_1041
107.1
P10809_1060
82.8
P10809_1077
72.6
P10809_1098
81.6
MAIT T-cell nTPM: 78.7
Samples: 6
Max nTPM: 109.2
Min nTPM: 44.9
P10809_1006
44.9
P10809_1024
97.6
P10809_1043
82.7
P10809_1062
77.6
P10809_1083
60.1
P10809_1097
109.2
Memory CD4 T-cell nTPM: 72.1
Samples: 6
Max nTPM: 95.0
Min nTPM: 47.9
P10809_1014
47.9
P10809_1026
95.0
P10809_1045
87.6
P10809_1064
65.7
P10809_1086
68.5
P10809_1113
68.0
Memory CD8 T-cell nTPM: 81.9
Samples: 5
Max nTPM: 119.3
Min nTPM: 41.6
P10809_1012
41.6
P10809_1027
94.2
P10809_1046
119.3
P10809_1065
77.9
P10809_1111
76.3
Naive CD4 T-cell nTPM: 63.3
Samples: 6
Max nTPM: 91.7
Min nTPM: 36.2
P10809_1015
36.2
P10809_1030
74.6
P10809_1049
91.7
P10809_1068
49.1
P10809_1085
66.6
P10809_1112
61.5
Naive CD8 T-cell nTPM: 63.9
Samples: 6
Max nTPM: 82.7
Min nTPM: 46.9
P10809_1016
47.4
P10809_1031
46.9
P10809_1050
73.8
P10809_1069
68.0
P10809_1087
82.7
P10809_1110
64.3
T-reg nTPM: 103.8
Samples: 6
Max nTPM: 132.6
Min nTPM: 60.8
P10809_1018
60.8
P10809_1037
132.6
P10809_1056
109.0
P10809_1075
103.5
P10809_1094
111.3
P10809_1106
105.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.3
Samples: 4
Max nTPM: 34.1
Min nTPM: 24.9
RHH5202_R3573
24.9
RHH5230_R3602
29.4
RHH5259_R3631
34.1
RHH5288_R3660
28.9
Effector memory CD8 T-cell nTPM: 26.9
Samples: 4
Max nTPM: 37.1
Min nTPM: 18.3
RHH5203_R3574
21.3
RHH5231_R3603
37.1
RHH5260_R3632
30.9
RHH5289_R3661
18.3
MAIT T-cell nTPM: 26.7
Samples: 4
Max nTPM: 41.3
Min nTPM: 18.3
RHH5233_R3605
25.2
RHH5205_R3576
21.8
RHH5262_R3634
18.3
RHH5297_R3663
41.3
Memory CD4 T-cell TFH nTPM: 26.8
Samples: 4
Max nTPM: 34.2
Min nTPM: 22.6
RHH5300_R3666
25.2
RHH5236_R3608
34.2
RHH5265_R3637
22.6
RHH5208_R3579
25.2
Memory CD4 T-cell Th1 nTPM: 28.9
Samples: 4
Max nTPM: 29.8
Min nTPM: 27.8
RHH5210_R3581
29.1
RHH5302_R3668
28.7
RHH5238_R3610
29.8
RHH5267_R3639
27.8
Memory CD4 T-cell Th1/Th17 nTPM: 19.7
Samples: 4
Max nTPM: 23.8
Min nTPM: 16.5
RHH5303_R3669
16.5
RHH5211_R3582
20.4
RHH5239_R3611
17.9
RHH5268_R3640
23.8
Memory CD4 T-cell Th17 nTPM: 28.1
Samples: 4
Max nTPM: 38.4
Min nTPM: 20.4
RHH5304_R3670
38.4
RHH5212_R3583
20.4
RHH5240_R3612
24.0
RHH5269_R3641
29.4
Memory CD4 T-cell Th2 nTPM: 17.4
Samples: 4
Max nTPM: 20.4
Min nTPM: 11.8
RHH5305_R3671
18.3
RHH5213_R3584
19.2
RHH5241_R3613
20.4
RHH5270_R3642
11.8
Naive CD4 T-cell nTPM: 29.7
Samples: 4
Max nTPM: 39.3
Min nTPM: 21.5
RHH5306_R3672
21.5
RHH5214_R3585
39.3
RHH5242_R3614
34.6
RHH5271_R3643
23.2
Naive CD8 T-cell nTPM: 20.5
Samples: 4
Max nTPM: 22.8
Min nTPM: 15.7
RHH5201_R3572
15.7
RHH5229_R3601
22.8
RHH5258_R3630
20.9
RHH5287_R3659
22.6
Non-Vd2 gdTCR nTPM: 31.1
Samples: 4
Max nTPM: 33.7
Min nTPM: 26.5
RHH5235_R3607
33.7
RHH5264_R3636
26.5
RHH5207_R3578
31.6
RHH5299_R3665
32.4
T-reg nTPM: 22.6
Samples: 4
Max nTPM: 24.5
Min nTPM: 21.5
RHH5301_R3667
21.5
RHH5237_R3609
22.8
RHH5266_R3638
24.5
RHH5209_R3580
21.6
Terminal effector memory CD4 T-cell nTPM: 39.3
Samples: 2
Max nTPM: 46.1
Min nTPM: 32.5
RHH5243_R3615
46.1
RHH5272_R3644
32.5
Terminal effector memory CD8 T-cell nTPM: 36.4
Samples: 4
Max nTPM: 51.3
Min nTPM: 20.4
RHH5232_R3604
20.4
RHH5204_R3575
41.2
RHH5261_R3633
32.7
RHH5296_R3662
51.3
Vd2 gdTCR nTPM: 43.0
Samples: 4
Max nTPM: 63.4
Min nTPM: 32.1
RHH5234_R3606
33.7
RHH5206_R3577
63.4
RHH5263_R3635
42.8
RHH5298_R3664
32.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
