PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Ponsi 		40.211
RNA expressioni
HPA Brain:158.5 nTPM
FANTOM5:97.6 Scaled Tags Per Million
Pig:98.1 nTPM
Mouse:96.6 nTPM
Allen mouse:6.4 Expression energy

PONS - Mouse brain profilei , antibody CAB017633
Pons mean intensity 40.211
intensityi
FRONT BACK
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 19.111
Parabrachial nucleus 40.211
Principle sensory trigeminal nucleus 18.443
Locus coeruleus 32.593
Pontine nucleus 13.960
Vestibular nucleus 16.930
Pontine reticular nucleus, oral 20.181
Lateral lemniscus 11.852
Superior paraolivary nucleus 18.097

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 158.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 86.5
2301 Female, age 85, both hemispheres 112.1
1984 Male, age 76, both hemispheres 95.1
2090 Male, age 80, both hemispheres 73.0
2188 Female, age 91, both hemispheres 65.6
Area postrema
nTPM: 55.4
2054 Male, age 76, both hemispheres 87.1
2799 Male, age 61, both hemispheres 40.1
2306 Male, age 80, both hemispheres 38.9
Dorsal cochlear nucleus
nTPM: 89.3
2058 Male, age 76, both hemispheres 100.5
2802 Male, age 74, right hemisphere 94.2
2370 Male, age 61, both hemispheres 90.7
2187 Female, age 91, both hemispheres 89.6
2378 Male, age 80, both hemispheres 71.3
Dorsal medullary reticular nucleus
nTPM: 103.6
2040 Female, age 85, both hemispheres 131.8
2373 Male, age 61, both hemispheres 96.1
2088 Male, age 76, both hemispheres 83.0
Dorsal motor vagal complex
nTPM: 91.5
2133 Female, age 91, both hemispheres 130.1
2813 Female, age 72, unknown 110.4
2844 Male, age 55, unknown 109.0
2000 Male, age 74, unknown 103.7
2643 Male, age 74, both hemispheres 75.8
2797 Male, age 61, both hemispheres 74.6
2807 Female, age 85, both hemispheres 71.4
2185 Male, age 76, both hemispheres 57.0
Dorsal tegmental nucleus
nTPM: 85.0
2083 Male, age 80, both hemispheres 100.4
1936 Male, age 76, left hemisphere 93.5
2358 Male, age 61, both hemispheres 82.4
2326 Male, age 74, both hemispheres 63.8
Dorsolateral tegmental area
nTPM: 87.2
2141 Male, age 76, both hemispheres 128.3
2751 Female, age 85, both hemispheres 100.8
2654 Male, age 80, both hemispheres 93.2
2360 Male, age 74, both hemispheres 70.2
2337 Male, age 61, both hemispheres 43.2
Gigantocellular reticular nuclei, medullary
nTPM: 111.1
2462 Male, age 74, both hemispheres 181.2
2310 Male, age 80, both hemispheres 115.9
2314 Male, age 61, both hemispheres 97.4
1876 Female, age 85, both hemispheres 97.0
2022 Male, age 76, right hemisphere 94.1
2387 Female, age 91, both hemispheres 81.1
Gigantocellular reticular nuclei, pars
nTPM: 125.1
2168 Male, age 76, both hemispheres 171.9
2084 Female, age 85, both hemispheres 124.8
2336 Male, age 61, both hemispheres 124.3
2330 Male, age 80, both hemispheres 102.8
2706 Male, age 80, both hemispheres 101.6
Inferior olive
nTPM: 86.9
2085 Female, age 85, both hemispheres 102.4
2563 Male, age 74, both hemispheres 93.1
2178 Male, age 61, both hemispheres 89.3
2628 Female, age 91, both hemispheres 80.4
2379 Male, age 80, both hemispheres 69.3
Kolliker-Fuse nucleus
nTPM: 93.7
2163 Male, age 80, both hemispheres 99.7
2793 Female, age 91, left hemisphere 94.8
2315 Male, age 76, right hemisphere 86.6
Lateral lemniscal nuclei
nTPM: 137.7
2169 Male, age 76, both hemispheres 157.2
2036 Male, age 80, both hemispheres 147.6
2746 Female, age 85, left hemisphere 146.5
2453 Male, age 74, right hemisphere 145.1
2320 Female, age 91, left hemisphere 92.4
Lateral medullary reticular nucleus
nTPM: 91.8
2374 Male, age 61, both hemispheres 121.5
2044 Male, age 76, both hemispheres 118.8
2804 Female, age 91, both hemispheres 102.6
2190 Female, age 85, both hemispheres 84.4
2305 Male, age 74, both hemispheres 66.0
2852 Male, age 80, both hemispheres 57.3
Lateral parabrachial nucleus
nTPM: 104.2
2139 Female, age 85, right hemisphere 166.9
2013 Male, age 80, both hemispheres 100.6
2790 Male, age 61, both hemispheres 85.7
2792 Male, age 76, both hemispheres 63.6
Lateral vestibular nucleus
nTPM: 93.7
2184 Male, age 76, both hemispheres 100.3
2311 Male, age 80, both hemispheres 87.2
Locus coeruleus
nTPM: 145.3
2123 Female, age 91, both hemispheres 177.6
2720 Male, age 74, both hemispheres 159.2
2788 Male, age 74, unknown 144.0
2014 Male, age 55, unknown 140.9
2162 Male, age 80, both hemispheres 135.0
2317 Female, age 72, unknown 131.4
1980 Male, age 76, both hemispheres 129.3
Medial olivary nucleus
nTPM: 60.8
2851 Male, age 80, both hemispheres 77.4
1962 Male, age 76, both hemispheres 58.5
2138 Female, age 91, both hemispheres 55.7
1943 Male, age 61, both hemispheres 51.6
Medial parabrachial nucleus
nTPM: 99.5
2854 Male, age 80, both hemispheres 119.1
2786 Male, age 76, both hemispheres 103.4
2170 Female, age 91, both hemispheres 92.6
2463 Female, age 85, right hemisphere 91.5
2156 Male, age 61, both hemispheres 91.1
Medial periolivary nuclei
nTPM: 134.3
2171 Female, age 85, both hemispheres 212.7
2063 Male, age 76, both hemispheres 167.3
2791 Male, age 74, right hemisphere 123.2
2081 Male, age 80, both hemispheres 85.6
2458 Female, age 91, both hemispheres 82.7
Medial vestibular nucleus
nTPM: 109.1
2134 Male, age 76, both hemispheres 121.6
2803 Female, age 91, both hemispheres 118.4
2743 Female, age 85, both hemispheres 115.4
2624 Male, age 61, both hemispheres 107.7
2801 Male, age 74, both hemispheres 99.7
2093 Male, age 80, both hemispheres 91.6
Motor facial nucleus
nTPM: 137.4
2062 Male, age 76, both hemispheres 181.9
2327 Male, age 80, both hemispheres 153.0
2365 Male, age 74, right hemisphere 143.0
2697 Female, age 85, both hemispheres 137.1
2795 Female, age 91, both hemispheres 106.8
2126 Male, age 61, both hemispheres 102.3
Motor hypoglossal nucleus
nTPM: 103.3
2461 Male, age 61, both hemispheres 119.9
2125 Female, age 91, both hemispheres 117.2
2132 Female, age 85, both hemispheres 109.6
2277 Male, age 76, both hemispheres 93.3
2182 Male, age 80, both hemispheres 76.6
Motor trigeminal nucleus
nTPM: 105.1
2079 Male, age 80, both hemispheres 131.8
2309 Male, age 76, both hemispheres 106.7
2560 Male, age 74, both hemispheres 105.9
2335 Male, age 61, both hemispheres 100.5
2321 Female, age 91, both hemispheres 80.6
Nuclei of the trapezoid body
nTPM: 152.8
2735 Female, age 85, both hemispheres 211.7
1983 Male, age 76, both hemispheres 169.4
2159 Male, age 61, both hemispheres 166.0
2166 Male, age 80, both hemispheres 115.3
2368 Female, age 91, both hemispheres 101.8
Nucleus ambiguus
nTPM: 86.0
2096 Female, age 85, both hemispheres 104.3
2071 Male, age 76, both hemispheres 67.7
Nucleus cuneatus
nTPM: 71.3
2131 Male, age 76, both hemispheres 105.8
2562 Male, age 61, both hemispheres 92.7
2100 Male, age 76, both hemispheres 85.1
2376 Male, age 61, both hemispheres 80.3
2381 Male, age 80, both hemispheres 67.1
2564 Male, age 74, both hemispheres 64.9
2805 Female, age 91, both hemispheres 54.3
2808 Female, age 85, both hemispheres 48.3
2380 Male, age 80, both hemispheres 42.9
Nucleus gracilis
nTPM: 47.7
2627 Male, age 74, both hemispheres 66.7
2382 Male, age 80, both hemispheres 41.1
2299 Female, age 85, both hemispheres 35.2
Nucleus raphe magnus
nTPM: 158.5
2172 Female, age 85, both hemispheres 235.6
2160 Male, age 61, both hemispheres 189.0
2455 Male, age 74, both hemispheres 165.0
2051 Male, age 76, both hemispheres 131.9
2328 Male, age 80, both hemispheres 128.4
2459 Female, age 91, both hemispheres 100.9
Nucleus raphe obscurus
nTPM: 83.0
2800 Male, age 61, midline 111.4
2845 Female, age 85, midline 96.9
2142 Male, age 76, midline 40.8
Nucleus raphe pallidus
nTPM: 75.0
2183 Male, age 80, midline 100.0
1924 Male, age 61, midline 69.1
2145 Male, age 76, midline 55.8
Nucleus tractus solitarii
nTPM: 91.5
2144 Female, age 91, right hemisphere 109.5
2656 Male, age 76, both hemispheres 107.4
2307 Male, age 80, both hemispheres 77.1
2191 Female, age 85, both hemispheres 72.0
Paramedian reticular nucleus
nTPM: 120.9
2050 Female, age 85, both hemispheres 165.1
2313 Male, age 61, both hemispheres 133.5
2057 Male, age 80, both hemispheres 100.2
2052 Male, age 76, both hemispheres 84.5
Parvicellular reticular nuclei
nTPM: 115.5
2558 Male, age 74, both hemispheres 151.5
2095 Male, age 76, both hemispheres 103.3
2119 Male, age 80, both hemispheres 91.6
Parvicellular reticular nuclei, medullary
nTPM: 113.5
2189 Female, age 91, both hemispheres 119.6
2091 Female, age 85, both hemispheres 110.6
2181 Male, age 80, left hemisphere 110.5
Pedunculopontine tegmental nucleus
nTPM: 102.1
1921 Female, age 85, both hemispheres 126.0
2334 Male, age 80, both hemispheres 105.8
2338 Male, age 61, both hemispheres 74.4
Peritrigeminal nucleus
nTPM: 104.1
2179 Male, age 61, both hemispheres 111.4
2136 Male, age 76, both hemispheres 102.4
2067 Female, age 85, both hemispheres 98.5
Pontine nuclei
nTPM: 132.2
2787 Female, age 85, both hemispheres 224.5
1863 Male, age 55, unknown 154.6
2727 Male, age 61, right hemisphere 152.8
1968 Male, age 76, left hemisphere 150.3
2109 Female, age 72, unknown 123.1
2115 Male, age 80, left hemisphere 99.7
2454 Male, age 74, left hemisphere 80.2
2319 Female, age 91, both hemispheres 72.3
Pontine raphe nucleus
nTPM: 147.7
2122 Female, age 85, midline 158.6
2853 Male, age 76, midline 136.9
Posteroventral cochlear nucleus
nTPM: 79.1
2752 Female, age 85, both hemispheres 145.2
2070 Male, age 76, both hemispheres 93.4
2371 Male, age 61, both hemispheres 70.3
2341 Male, age 80, both hemispheres 60.7
2135 Female, age 91, both hemispheres 25.8
Prepositus hypoglossal nucleus
nTPM: 96.0
2855 Female, age 85, right hemisphere 99.6
2086 Male, age 80, both hemispheres 92.4
Principal sensory trigeminal nucleus
nTPM: 122.5
2158 Male, age 61, both hemispheres 161.3
2008 Male, age 80, left hemisphere 141.4
2324 Male, age 76, both hemispheres 98.3
2367 Female, age 91, left hemisphere 89.1
Reticular pontine nucleus, caudal
nTPM: 103.2
2332 Male, age 80, right hemisphere 142.0
2092 Male, age 76, both hemispheres 126.1
2457 Female, age 91, both hemispheres 80.0
2559 Male, age 74, both hemispheres 64.7
Reticular pontine nucleus, oral
nTPM: 108.3
2012 Female, age 85, both hemispheres 138.9
2167 Male, age 76, both hemispheres 116.3
2361 Male, age 74, both hemispheres 114.0
1939 Male, age 80, both hemispheres 101.0
2366 Female, age 91, both hemispheres 71.4
Reticulotegmental nucleus
nTPM: 112.1
2325 Male, age 76, both hemispheres 151.1
2333 Male, age 80, both hemispheres 103.1
2452 Male, age 74, both hemispheres 98.2
2322 Female, age 91, both hemispheres 95.9
Spinal trigeminal nucleus, caudal
nTPM: 96.1
2390 Female, age 91, both hemispheres 133.8
2447 Male, age 76, both hemispheres 104.6
2642 Male, age 74, both hemispheres 82.2
2312 Male, age 61, both hemispheres 80.7
2308 Male, age 80, both hemispheres 79.2
Spinal trigeminal nucleus, interpolar
nTPM: 123.2
2066 Male, age 76, right hemisphere 163.8
2625 Male, age 61, both hemispheres 127.5
2389 Female, age 91, both hemispheres 124.4
2386 Female, age 85, both hemispheres 102.2
2033 Male, age 80, both hemispheres 98.0
Spinal trigeminal nucleus, oral
nTPM: 104.8
2737 Female, age 85, both hemispheres 110.1
1978 Male, age 76, both hemispheres 105.6
2164 Male, age 80, both hemispheres 98.6
Spinal vestibular nucleus
nTPM: 100.1
2186 Female, age 91, both hemispheres 120.2
2796 Male, age 61, both hemispheres 111.4
2806 Female, age 85, both hemispheres 108.9
2780 Male, age 80, both hemispheres 98.9
2748 Male, age 76, both hemispheres 92.8
2384 Male, age 74, both hemispheres 68.2
Subcoeruleus area
nTPM: 111.8
2323 Female, age 91, left hemisphere 141.2
2089 Male, age 76, left hemisphere 133.5
1958 Male, age 80, both hemispheres 126.5
2369 Female, age 85, left hemisphere 79.8
2451 Male, age 74, both hemispheres 77.8
Superior olive
nTPM: 131.0
1875 Female, age 85, both hemispheres 177.6
2329 Male, age 80, right hemisphere 125.4
2364 Male, age 74, right hemisphere 124.4
2020 Male, age 76, both hemispheres 118.8
2561 Female, age 91, both hemispheres 108.8
Superior vestibular nucleus
nTPM: 95.6
2061 Male, age 76, both hemispheres 99.1
2383 Male, age 74, both hemispheres 97.8
2015 Male, age 80, both hemispheres 89.8
Ventral medullary reticular nucleus
nTPM: 104.1
2372 Male, age 61, both hemispheres 108.9
2060 Male, age 76, both hemispheres 99.3
Ventral periolivary nuclei
nTPM: 153.3
2130 Female, age 85, both hemispheres 212.5
2165 Male, age 80, both hemispheres 154.7
2794 Female, age 91, left hemisphere 128.7
2023 Male, age 76, both hemispheres 117.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 95.7
2180 Male, age 61, both hemispheres 114.9
2741 Female, age 85, both hemispheres 109.5
1986 Male, age 76, both hemispheres 98.3
2302 Female, age 91, both hemispheres 93.5
2118 Male, age 80, both hemispheres 62.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 117.4
2449 Male, age 74, both hemispheres 152.8
2840 Female, age 85, both hemispheres 145.8
1959 Male, age 76, both hemispheres 134.7
2161 Male, age 80, both hemispheres 113.2
2359 Male, age 61, both hemispheres 87.0
2456 Female, age 91, both hemispheres 70.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 57.1
FF:10182-103D2 60 years, female 64.2
FF:10165-103B3 76 years, female 50.0
Medulla oblongata
Scaled Tags Per Million: 46.5
FF:10038-101F2 18-64 years, mixed 63.2
FF:10155-103A2 76 years, female 42.6
FF:10174-103C3 60 years, female 33.7
Pons
Scaled Tags Per Million: 97.6
FF:10033-101E6 18-54 years, mixed 97.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 98.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 73.0
Samples: 4

Max nTPM: 85.8
Min nTPM: 45.7
Sample A Female 84.5
Sample B Female 76.0
Sample C Male 85.8
Sample D Male 45.7
Pons
nTPM: 98.1
Samples: 4

Max nTPM: 118.0
Min nTPM: 83.1
Sample A Female 118.0
Sample B Female 97.9
Sample C Male 93.2
Sample D Male 83.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 96.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 96.6
Samples: 4

Max nTPM: 103.2
Min nTPM: 88.1
Sample A Male 103.2
Sample B Male 96.4
Sample C Female 98.8
Sample D Female 88.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.4
69838258 Antisense, RP_050301_01_B07, Mouse strain C57BL/6J (56 days, male) 6.4
Pons
Expression energy: 6.4
69838258 Antisense, RP_050301_01_B07, Mouse strain C57BL/6J (56 days, male) 6.4

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