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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
132.0
nTPM
Monaco:
119.6
nTPM
Schmiedel:
173.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
132.0
HPA sample
nTPM
gdT-cell nTPM: 93.2
Samples: 6
Max nTPM: 116.3
Min nTPM: 66.1
P10809_1007
66.1
P10809_1022
115.7
P10809_1041
116.3
P10809_1060
71.1
P10809_1077
97.4
P10809_1098
92.7
MAIT T-cell nTPM: 104.6
Samples: 6
Max nTPM: 124.9
Min nTPM: 81.4
P10809_1006
81.4
P10809_1024
105.5
P10809_1043
118.7
P10809_1062
103.5
P10809_1083
93.8
P10809_1097
124.9
Memory CD4 T-cell nTPM: 96.8
Samples: 6
Max nTPM: 118.3
Min nTPM: 83.7
P10809_1014
84.1
P10809_1026
105.4
P10809_1045
118.3
P10809_1064
83.7
P10809_1086
94.0
P10809_1113
95.5
Memory CD8 T-cell nTPM: 97.4
Samples: 5
Max nTPM: 118.9
Min nTPM: 80.0
P10809_1012
80.0
P10809_1027
96.3
P10809_1046
118.9
P10809_1065
92.9
P10809_1111
98.7
Naive CD4 T-cell nTPM: 115.2
Samples: 6
Max nTPM: 190.8
Min nTPM: 72.3
P10809_1015
72.3
P10809_1030
124.6
P10809_1049
190.8
P10809_1068
107.0
P10809_1085
102.4
P10809_1112
93.9
Naive CD8 T-cell nTPM: 99.3
Samples: 6
Max nTPM: 116.3
Min nTPM: 77.2
P10809_1016
77.2
P10809_1031
96.5
P10809_1050
116.3
P10809_1069
106.7
P10809_1087
99.1
P10809_1110
100.1
T-reg nTPM: 132.0
Samples: 6
Max nTPM: 152.6
Min nTPM: 90.3
P10809_1018
90.3
P10809_1037
148.7
P10809_1056
152.6
P10809_1075
147.4
P10809_1094
137.1
P10809_1106
116.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
119.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 97.0
Min nTPM: 72.8
RHH5202_R3573
97.0
RHH5230_R3602
72.8
RHH5259_R3631
95.1
RHH5288_R3660
96.2
Effector memory CD8 T-cell nTPM: 119.3
Samples: 4
Max nTPM: 144.8
Min nTPM: 80.7
RHH5203_R3574
144.8
RHH5231_R3603
80.7
RHH5260_R3632
115.2
RHH5289_R3661
136.4
MAIT T-cell nTPM: 115.2
Samples: 4
Max nTPM: 131.0
Min nTPM: 101.1
RHH5233_R3605
101.1
RHH5205_R3576
131.0
RHH5262_R3634
122.3
RHH5297_R3663
106.2
Memory CD4 T-cell TFH nTPM: 98.2
Samples: 4
Max nTPM: 118.7
Min nTPM: 65.9
RHH5300_R3666
65.9
RHH5236_R3608
109.1
RHH5265_R3637
99.0
RHH5208_R3579
118.7
Memory CD4 T-cell Th1 nTPM: 99.9
Samples: 4
Max nTPM: 125.0
Min nTPM: 61.6
RHH5210_R3581
118.3
RHH5302_R3668
94.8
RHH5238_R3610
61.6
RHH5267_R3639
125.0
Memory CD4 T-cell Th1/Th17 nTPM: 106.8
Samples: 4
Max nTPM: 121.2
Min nTPM: 86.9
RHH5303_R3669
121.2
RHH5211_R3582
110.9
RHH5239_R3611
86.9
RHH5268_R3640
108.3
Memory CD4 T-cell Th17 nTPM: 106.5
Samples: 4
Max nTPM: 127.9
Min nTPM: 93.3
RHH5304_R3670
109.9
RHH5212_R3583
93.3
RHH5240_R3612
127.9
RHH5269_R3641
95.0
Memory CD4 T-cell Th2 nTPM: 101.6
Samples: 4
Max nTPM: 118.1
Min nTPM: 92.2
RHH5305_R3671
100.1
RHH5213_R3584
118.1
RHH5241_R3613
92.2
RHH5270_R3642
96.0
Naive CD4 T-cell nTPM: 109.9
Samples: 4
Max nTPM: 145.2
Min nTPM: 80.2
RHH5306_R3672
96.7
RHH5214_R3585
117.3
RHH5242_R3614
80.2
RHH5271_R3643
145.2
Naive CD8 T-cell nTPM: 98.4
Samples: 4
Max nTPM: 124.1
Min nTPM: 77.6
RHH5201_R3572
108.0
RHH5229_R3601
77.6
RHH5258_R3630
83.9
RHH5287_R3659
124.1
Non-Vd2 gdTCR nTPM: 109.3
Samples: 4
Max nTPM: 121.2
Min nTPM: 90.4
RHH5235_R3607
111.4
RHH5264_R3636
114.0
RHH5207_R3578
121.2
RHH5299_R3665
90.4
T-reg nTPM: 115.5
Samples: 4
Max nTPM: 143.5
Min nTPM: 83.4
RHH5301_R3667
83.4
RHH5237_R3609
143.5
RHH5266_R3638
113.8
RHH5209_R3580
121.1
Terminal effector memory CD4 T-cell nTPM: 91.6
Samples: 2
Max nTPM: 104.7
Min nTPM: 78.5
RHH5243_R3615
104.7
RHH5272_R3644
78.5
Terminal effector memory CD8 T-cell nTPM: 119.6
Samples: 4
Max nTPM: 132.2
Min nTPM: 109.4
RHH5232_R3604
132.2
RHH5204_R3575
114.0
RHH5261_R3633
122.9
RHH5296_R3662
109.4
Vd2 gdTCR nTPM: 96.8
Samples: 4
Max nTPM: 124.0
Min nTPM: 77.7
RHH5234_R3606
96.3
RHH5206_R3577
89.1
RHH5263_R3635
124.0
RHH5298_R3664
77.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
