HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:118.5 nTPM
HPA Brain:188.2 nTPM
GTEx:118.5 nTPM
FANTOM5:50.4 Scaled Tags Per Million
Pig:66.9 nTPM
Mouse:77.7 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 188.2
Sample id Sample description nTPM
Hippocampus
nTPM: 188.2
2529 Female, age 94, left hemisphere 220.8
2621 Female, age 67, right hemisphere 219.4
2148 Female, age 91, left hemisphere 191.7
1855 Male, age 76, left hemisphere 170.5
1911 Female, age 85, right hemisphere 166.1
1898 Male, age 80, left hemisphere 160.4
Dentate gyrus
nTPM: 170.7
2531 Female, age 67, both hemispheres 220.7
1927 Female, age 91, both hemispheres 193.4
2530 Female, age 94, left hemisphere 181.3
2528 Male, age 74, both hemispheres 154.3
2010 Male, age 76, both hemispheres 152.4
2246 Female, age 85, both hemispheres 122.0
Entorhinal gyrus
nTPM: 155.1
2613 Female, age 94, left hemisphere 197.0
2764 Male, age 80, right hemisphere 160.2
2686 Male, age 75, right hemisphere 153.1
2117 Female, age 91, right hemisphere 151.1
1938 Female, age 85, left hemisphere 136.0
1787 Male, age 76, left hemisphere 133.4
Hippocampus, CA1
nTPM: 166.7
2749 Male, age 80, left hemisphere 216.9
2527 Male, age 74, both hemispheres 182.9
1873 Female, age 85, both hemispheres 150.7
2082 Female, age 91, right hemisphere 148.8
2045 Male, age 76, both hemispheres 134.4
Hippocampus, CA2
nTPM: 171.2
1963 Male, age 80, left hemisphere 285.0
2113 Female, age 91, right hemisphere 173.0
2437 Female, age 94, left hemisphere 169.1
1892 Male, age 76, both hemispheres 153.8
2249 Male, age 74, both hemispheres 131.9
1940 Female, age 85, left hemisphere 114.3
Hippocampus, CA3
nTPM: 173.1
2861 Female, age 67, both hemispheres 230.5
2137 Male, age 80, left hemisphere 211.1
2620 Female, age 94, left hemisphere 191.1
1867 Male, age 76, both hemispheres 150.1
2436 Male, age 74, both hemispheres 129.7
1891 Female, age 85, both hemispheres 125.8
Parahippocampal cortex
nTPM: 141.1
2245 Female, age 91, both hemispheres 189.0
2018 Male, age 76, both hemispheres 172.8
2250 Female, age 67, right hemisphere 143.0
2622 Female, age 67, right hemisphere 139.4
1933 Female, age 85, both hemispheres 138.8
2693 Female, age 94, both hemispheres 134.1
2532 Female, age 72, left hemisphere 129.8
1850 Male, age 80, both hemispheres 124.0
1990 Female, age 91, right hemisphere 122.9
2692 Male, age 74, both hemispheres 117.1
Perirhinal gyrus
nTPM: 139.9
2521 Female, age 94, right hemisphere 168.9
1847 Female, age 91, left hemisphere 150.0
1794 Male, age 80, right hemisphere 141.5
2848 Male, age 76, right hemisphere 123.6
1841 Female, age 85, right hemisphere 115.7
Subiculum
nTPM: 134.6
2042 Male, age 76, both hemispheres 157.0
1901 Male, age 80, both hemispheres 143.1
2729 Female, age 91, right hemisphere 142.3
1977 Female, age 85, both hemispheres 136.4
2619 Male, age 74, both hemispheres 120.6
2438 Female, age 94, left hemisphere 108.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.5
Samples: 197

Max nTPM: 393.0
Min nTPM: 25.8
Std nTPM: 48.5
Median nTPM: 108.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 393.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 303.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 264.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 243.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 236.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 233.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 231.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 225.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 219.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 218.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 212.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.4
FF:10153-102I9 76 years, female 60.4
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.9
Pig sample Sample description nTPM
Subiculum
nTPM: 54.3
Samples: 4

Max nTPM: 71.9
Min nTPM: 43.0
Sample A Female 71.9
Sample B Female 50.0
Sample C Male 52.3
Sample D Male 43.0
Dorsal hippocampus
nTPM: 66.9
Samples: 4

Max nTPM: 86.3
Min nTPM: 51.2
Sample A Female 86.3
Sample B Female 70.4
Sample C Male 59.7
Sample D Male 51.2
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 72.0
Min nTPM: 50.2
Sample A Female 56.8
Sample B Female 50.2
Sample C Male 72.0
Sample D Male 50.8
Ventral hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 83.6
Min nTPM: 42.4
Sample A Female 54.6
Sample B Female 42.4
Sample C Male 73.2
Sample D Male 83.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.5
Samples: 4

Max nTPM: 58.2
Min nTPM: 50.6
Sample A Male 57.8
Sample B Male 50.6
Sample C Female 55.2
Sample D Female 58.2
Hippocampal formation
nTPM: 77.7
Samples: 4

Max nTPM: 97.5
Min nTPM: 64.0
Sample A Male 64.0
Sample B Male 77.1
Sample C Female 97.5
Sample D Female 72.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
227739 Antisense, RP_040609_01_C09, Mouse strain C57BL/6J (56 days, male) 16.0
276264 Antisense, RP_040609_01_C09, Mouse strain C57BL/6J (56 days, male) 8.6

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