HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:98.5 nTPM
HPA Brain:207.5 nTPM
GTEx:98.5 nTPM
FANTOM5:206.1 Scaled Tags Per Million
Pig:21.6 nTPM
Mouse:20.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001209
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 207.5
Sample id Sample description nTPM
Hippocampus
nTPM: 186.9
1898 Male, age 80, left hemisphere 193.5
1911 Female, age 85, right hemisphere 193.4
2148 Female, age 91, left hemisphere 192.0
1855 Male, age 76, left hemisphere 189.7
2621 Female, age 67, right hemisphere 180.8
2529 Female, age 94, left hemisphere 172.1
Dentate gyrus
nTPM: 192.2
2530 Female, age 94, left hemisphere 260.7
2010 Male, age 76, both hemispheres 202.6
2528 Male, age 74, both hemispheres 195.5
2246 Female, age 85, both hemispheres 173.2
2531 Female, age 67, both hemispheres 172.3
1927 Female, age 91, both hemispheres 149.0
Entorhinal gyrus
nTPM: 169.6
2117 Female, age 91, right hemisphere 276.4
2764 Male, age 80, right hemisphere 221.6
2613 Female, age 94, left hemisphere 139.6
1938 Female, age 85, left hemisphere 135.7
1787 Male, age 76, left hemisphere 133.3
2686 Male, age 75, right hemisphere 111.0
Hippocampus, CA1
nTPM: 165.9
1873 Female, age 85, both hemispheres 181.4
2527 Male, age 74, both hemispheres 177.4
2082 Female, age 91, right hemisphere 169.6
2749 Male, age 80, left hemisphere 156.1
2045 Male, age 76, both hemispheres 145.0
Hippocampus, CA2
nTPM: 194.3
1963 Male, age 80, left hemisphere 239.9
2249 Male, age 74, both hemispheres 218.2
1940 Female, age 85, left hemisphere 202.1
2113 Female, age 91, right hemisphere 197.5
2437 Female, age 94, left hemisphere 186.0
1892 Male, age 76, both hemispheres 122.4
Hippocampus, CA3
nTPM: 160.1
1891 Female, age 85, both hemispheres 220.7
2620 Female, age 94, left hemisphere 206.1
1867 Male, age 76, both hemispheres 144.9
2436 Male, age 74, both hemispheres 137.8
2861 Female, age 67, both hemispheres 134.0
2137 Male, age 80, left hemisphere 117.3
Parahippocampal cortex
nTPM: 137.0
1990 Female, age 91, right hemisphere 197.9
2532 Female, age 72, left hemisphere 174.8
2692 Male, age 74, both hemispheres 173.9
2245 Female, age 91, both hemispheres 145.9
2018 Male, age 76, both hemispheres 140.4
1933 Female, age 85, both hemispheres 128.1
1850 Male, age 80, both hemispheres 119.2
2250 Female, age 67, right hemisphere 106.0
2693 Female, age 94, both hemispheres 102.4
2622 Female, age 67, right hemisphere 81.2
Perirhinal gyrus
nTPM: 105.3
2521 Female, age 94, right hemisphere 138.0
1794 Male, age 80, right hemisphere 110.3
1847 Female, age 91, left hemisphere 103.6
1841 Female, age 85, right hemisphere 87.6
2848 Male, age 76, right hemisphere 86.8
Subiculum
nTPM: 207.5
2042 Male, age 76, both hemispheres 272.9
1901 Male, age 80, both hemispheres 242.9
1977 Female, age 85, both hemispheres 201.6
2619 Male, age 74, both hemispheres 186.9
2729 Female, age 91, right hemisphere 183.7
2438 Female, age 94, left hemisphere 157.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 98.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.5
Samples: 197

Max nTPM: 339.8
Min nTPM: 19.8
Std nTPM: 57.5
Median nTPM: 84.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 339.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 309.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 292.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 292.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 275.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 270.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 262.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 248.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 237.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 237.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 221.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 206.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 206.1
FF:10153-102I9 76 years, female 228.5
FF:10169-103B7 60 years, female 183.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.6
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 19.9
Min nTPM: 17.7
Sample A Female 19.8
Sample B Female 19.9
Sample C Male 18.0
Sample D Male 17.7
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 22.5
Min nTPM: 13.4
Sample A Female 22.5
Sample B Female 20.5
Sample C Male 20.2
Sample D Male 13.4
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.3
Sample A Female 16.5
Sample B Female 18.5
Sample C Male 16.8
Sample D Male 13.3
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 28.6
Min nTPM: 17.8
Sample A Female 20.5
Sample B Female 17.8
Sample C Male 28.6
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.6
Sample A Male 23.1
Sample B Male 20.7
Sample C Female 18.6
Sample D Female 20.0
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.8
Sample A Male 16.6
Sample B Male 14.8
Sample C Female 16.4
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69527860 Antisense, RP_050421_02_F04, Mouse strain C57BL/6J (56 days, male) 1.1
74658032 Antisense, RP_060220_04_C05, Mouse strain C57BL/6J (56 days, male) 0.3

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